PIPI2: Sensitive Tag-Based Database Search to Identify Peptides with Multiple Post-translational Modifications-Reference-Cited by-同舟云学术

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PIPI2: Sensitive Tag-Based Database Search to Identify Peptides with Multiple Post-translational Modifications

Published:2024-05-21 Issue:6 Volume:23 Page:1960-1969
ISSN:1535-3893
Container-title:Journal of Proteome Research
language:en
Short-container-title:J. Proteome Res.

Author:

Lai Shengzhi¹^ORCID,Zhao Peize²,Zhou Chen¹^ORCID,Li Ning³⁴,Yu Weichuan¹³^ORCID

Affiliation:

1. Department of Electronic and Computer Engineering, The Hong Kong University of Science and Technology, Hong Kong, Hong Kong, China

2. Interdisciplinary Programs Office, The Hong Kong University of Science and Technology, Hong Kong, Hong Kong, China

3. Shenzhen-Hong Kong Collaborative Innovation Research Institute, HKUST, Futian, Shenzhen 518000, China

4. Division of Life Science, The Hong Kong University of Science and Technology, Hong Kong, Hong Kong, China

Funder

Research Grants Council, University Grants Committee

Innovation and Technology Commission

Hong Kong University of Science and Technology

Hetao Shenzhen-Hong Kong Science and Technology Innovation Cooperation Zone

Publisher

American Chemical Society (ACS)

Link

https://pubs.acs.org/doi/pdf/10.1021/acs.jproteome.3c00819

Reference45 articles.

1. Analysis and validation of proteomic data generated by tandem mass spectrometry

2. An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

3. A survey of computational methods and error rate estimation procedures for peptide and protein identification in shotgun proteomics

4. The application of targeted mass spectrometry-based strategies to the detection and localization of post-translational modifications

5. Illuminating the dark matter of shotgun proteomics

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