UUCG RNA Tetraloop as a Formidable Force-Field Challenge for MD Simulations-Reference-Cited by-同舟云学术

UUCG RNA Tetraloop as a Formidable Force-Field Challenge for MD Simulations

Published:2020-11-20 Issue:12 Volume:16 Page:7601-7617
ISSN:1549-9618
Container-title:Journal of Chemical Theory and Computation
language:en
Short-container-title:J. Chem. Theory Comput.

Author:

Mráziková Klaudia¹²,Mlýnský Vojtěch¹^ORCID,Kührová Petra³^ORCID,Pokorná Pavlína¹²,Kruse Holger¹^ORCID,Krepl Miroslav¹³^ORCID,Otyepka Michal¹³^ORCID,Banáš Pavel¹³^ORCID,Šponer Jiří¹^ORCID

Affiliation:

1. Institute of Biophysics of the Czech Academy of Sciences, Královopolská 135, 612 65 Brno, Czech Republic

2. National Centre for Biomolecular Research, Faculty of Science, Masaryk University, Kamenice 5, 625 00 Brno, Czech Republic

3. Regional Centre of Advanced Technologies and Materials, Faculty of Science, Palacký University, Šlechtitelů 27, 783 71 Olomouc, Czech Republic

Funder

European Regional Development Fund

Grantov? Agentura Cesk? Republiky

Publisher

American Chemical Society (ACS)

Subject

Physical and Theoretical Chemistry,Computer Science Applications

Link

https://pubs.acs.org/doi/pdf/10.1021/acs.jctc.0c00801

Reference101 articles.

1. Molecular Dynamics and Quantum Mechanics of RNA: Conformational and Chemical Change We Can Believe In

2. Twenty-five years of nucleic acid simulations

3. Molecular Dynamics Simulations of Nucleic Acids. From Tetranucleotides to the Ribosome

4. RNA Structural Dynamics As Captured by Molecular Simulations: A Comprehensive Overview

5. New developments in force fields for biomolecular simulations

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