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iBioSim 3: A Tool for Model-Based Genetic Circuit Design

  • Published:2018-06-26 Issue:7 Volume:8 Page:1560-1563
  • ISSN:2161-5063
  • Container-title:ACS Synthetic Biology
  • language:en
  • Short-container-title:ACS Synth. Biol.

Author:

Watanabe Leandro1ORCID,Nguyen Tramy1ORCID,Zhang Michael1ORCID,Zundel Zach1ORCID,Zhang Zhen2,Madsen Curtis3,Roehner Nicholas4,Myers Chris1

Affiliation:

1. Department of Electrical and Computer Engineering, University of Utah, Salt Lake City, Utah 84112, United States

2. Department of Electrical and Computer Engineering, Utah State University, Logan, Utah 84322, United States

3. Department of Electrical and Computer Engineering, Boston University, Boston, Massachusetts 02215, United States

4. Raytheon BBN Technologies, Cambridge, Massachusetts 02138, United States

Funder

Division of Computing and Communication Foundations

Division of Biological Infrastructure

Publisher

American Chemical Society (ACS)

Subject

Biochemistry, Genetics and Molecular Biology (miscellaneous),Biomedical Engineering,General Medicine

Reference31 articles.

1. iBioSim: a tool for the analysis and design of genetic circuits

2. 06 2012 C1 C1 6327710 10.1109/MDT.2012.2211731 http://ieeexplore.ieee.org/lpdocs/epic03/wrapper.htm?arnumber=6327710 <![CDATA[Design and Test of Genetic Circuits Using <formula formulatype="inline"><tex Notation="TeX"> ${\tt iBioSim}$</tex></formula>iBioSim</a></p><p>3. <a href="/WebPortal/ArticleView?wd=374B03C8C40BE28806AABCD9C7111F43515763AC799C734B" target="_blank">Genetic circuit design automation</a></p><p>4. <a href="/WebPortal/ArticleView?wd=E750A08055F1E11FD2A1F5740E41191B" target="_blank">libRoadRunner: A High Performance SBML Compliant Simulator</a></p><p>5. <a href="/WebPortal/ArticleView?wd=E34FE33E82A052E6AC083C8548409758180DFBE5EDBFA9541BD79A5B6867C431" target="_blank">COPASI--a COmplex PAthway SImulator</a></p></div> </div> <div id="ContentPlaceHolder1_divCited" class="cited mt40"> <p class="font-bold font20">Cited by<span class="reference-num"> <span id="ContentPlaceHolder1_LabelCitedcount">63</span> articles.</span> <span class="reference-num"> <a onclick="return confirm('您确定要订阅此论文施引文献吗？');" id="ContentPlaceHolder1_LinkButton3" class="mr15 color-wit line-h pl10 bg-red" href="javascript:__doPostBack('ctl00$ContentPlaceHolder1$LinkButton3','')">订阅此论文施引文献</a> <span id="ContentPlaceHolder1_Label3">订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献</span> <span id="ContentPlaceHolder1_lbMsg"></span> </span> </p> <div id="ContentPlaceHolder1_divCited2" class="reference-item color-gray2 mt10"><p>1. <a href="/WebPortal/ArticleView?wd=8FF74A1A4A11A08039F341CD6EC3B99097AB640293E812A22AF20E305A177C77" target="_blank">Evaluating the Contribution of Model Complexity in Predicting Robustness in Synthetic Genetic Circuits</a>;ACS Synthetic Biology;2024-09-12</p><p>2. <a href="/WebPortal/ArticleView?wd=8FF74A1A4A11A08039F341CD6EC3B9908871C31035FE3549BB4CC67AEBE3C9C3" target="_blank">Computational Synthetic Biology Enabled through JAX: A Showcase</a>;ACS Synthetic Biology;2024-09-04</p><p>3. <a href="/WebPortal/ArticleView?wd=4C5A8D0827CA78F7DB39AD6E421DFE7DE192DEAB3EC1B0F5B3A9B63927181D03" target="_blank">Genetic circuits for metabolic flux optimization</a>;Trends in Microbiology;2024-08</p><p>4. <a href="/WebPortal/ArticleView?wd=4C5A8D0827CA78F7C34C1CB3B0640BD95AE11BC2C6F8EB245B707E1CA56D42BF" target="_blank">Design, modeling and in silico simulation of bacterial biosensors for detecting heavy metals in irrigation water for precision agriculture</a>;Heliyon;2024-08</p><p>5. <a href="/WebPortal/ArticleView?wd=03E459076164F53E8BB4F2342679A9CEE2AF854C3F2C8C0A00C93183DA34677F" target="_blank">Technologies for design-build-test-learn automation and computational modelling across the synthetic biology workflow: a review</a>;Network Modeling Analysis in Health Informatics and Bioinformatics;2024-05-03</p></div> </div> </div> </div> <!----------------------------------到这结束----------------------------------------> <!--main end--> </div> <input type="hidden" name="ctl00$ContentPlaceHolder1$HiddenField1" id="ContentPlaceHolder1_HiddenField1" value="8FF74A1A4A11A08039F341CD6EC3B9903742CC282D65765DC35D2600AFDC3D93" /> </td> </tr> </table> </td> </tr> <tr> <td> <!--foot start--> <div class="box100 foot "> <div class="box1200 mau clearfix"> <div class="pt20 pb20 font24">同舟云学术</div> <div class="fl box50"> <div class="box100 clearfix"> <p class="foot-tip fl mr15 fun-btn"><span>1.学者识别</span>学者识别</p> <p class="foot-tip fl mr15 fun-btn"><span>2.学术分析</span>学术分析</p> <p class="foot-tip fl mr15 fun-btn"><span>3.人才评估</span>人才评估</p> </div> <p class="font12 pr40 pt20 pb20 color-gray">"同舟云学术"是以全球学者为主线，采集、加工和组织学术论文而形成的新型学术文献查询和分析系统，可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容，当前同舟云学术共收录了国内外主流学术期刊6万余种，收集的期刊论文及会议论文总量共计约1.5亿篇，并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询！咨询电话：010-8811<span style="font-size:0px;color:white">{复制后删除}</span>0370</p> <p class="color-gray"><b><a href="/">www.globalauthorid.com</a></b></p> </div> <div class="fr qerbox "> <p class="color-blue text-center pt20 pb10">TOP</p> <a href="#top" class="btn-top mau"><img src="/images/top.png" alt=""></a> </div> <div class="fr qerbox mr15"><img src="/images/code_web.png" alt=""></div> </div> <p class="pt20 pb20 text-center">Copyright © 2019-2024 北京同舟云网络信息技术有限公司<br> <a href="http://www.beian.gov.cn/portal/registerSystemInfo?recordcode=11010802033243" target="_blank">京公网安备11010802033243号</a>  <a href="https://beian.miit.gov.cn/#/Integrated/index" target="_blank">京ICP备18003416号-3</a></p> </div> <!--foot end--> </td> </tr> </table> </form> </body> </html>