Predictive analysis across spatial scales links zoonotic malaria to deforestation

Author:

Brock Patrick M.1ORCID,Fornace Kimberly M.2ORCID,Grigg Matthew J.3,Anstey Nicholas M.3,William Timothy45,Cox Jon2,Drakeley Chris J.2ORCID,Ferguson Heather M.1,Kao Rowland R.16ORCID

Affiliation:

1. Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G61 1QH, UK

2. London School of Hygiene and Tropical Medicine, Keppel Street, London WC1E 7HT, UK

3. Global and Tropical Health Division, Menzies School of Health Research and Charles Darwin University, Darwin, Northern Territory 0810, Australia

4. Gleneagles Kota Kinabalu Hospital, 88100, Kota Kinabalu, Sabah, Malaysia

5. Infectious Diseases Society, Sabah-Menzies School of Health Research Clinical Research Unit, Kota Kinabalu 88560, Sabah, Malaysia

6. Royal (Dick) School of Veterinary Studies and Roslin Institute, University of Edinburgh, Easter Bush Campus, Roslin, Midlothian EH25 9RG, UK

Abstract

The complex transmission ecologies of vector-borne and zoonotic diseases pose challenges to their control, especially in changing landscapes. Human incidence of zoonotic malaria ( Plasmodium knowlesi ) is associated with deforestation although mechanisms are unknown. Here, a novel application of a method for predicting disease occurrence that combines machine learning and statistics is used to identify the key spatial scales that define the relationship between zoonotic malaria cases and environmental change. Using data from satellite imagery, a case–control study, and a cross-sectional survey, predictive models of household-level occurrence of P. knowlesi were fitted with 16 variables summarized at 11 spatial scales simultaneously. The method identified a strong and well-defined peak of predictive influence of the proportion of cleared land within 1 km of households on P. knowlesi occurrence. Aspect (1 and 2 km), slope (0.5 km) and canopy regrowth (0.5 km) were important at small scales. By contrast, fragmentation of deforested areas influenced P. knowlesi occurrence probability most strongly at large scales (4 and 5 km). The identification of these spatial scales narrows the field of plausible mechanisms that connect land use change and P. knowlesi , allowing for the refinement of disease occurrence predictions and the design of spatially-targeted interventions.

Funder

Medical Research Council

National Health and Medical Research Council

Publisher

The Royal Society

Subject

General Agricultural and Biological Sciences,General Environmental Science,General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine

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