A Standardized Nomenclature Design for Systematic Referencing and Identification of Animal Cellular Material

Author:

Schrade Lisa12ORCID,Mah Nancy1ORCID,Bandrowski Anita34ORCID,Chen Ying1ORCID,Dewender Johannes1ORCID,Diecke Sebastian5ORCID,Hiepen Christian1ORCID,Lancaster Madeline A.6ORCID,Marques-Bonet Tomas78910ORCID,Martinez Sira711ORCID,Mueller Sabine C.1ORCID,Navara Christopher12ORCID,Prigione Alessandro13ORCID,Seltmann Stefanie1ORCID,Sochacki Jaroslaw11ORCID,Sutcliffe Magdalena A.6ORCID,Zywitza Vera5ORCID,Hildebrandt Thomas B.214ORCID,Kurtz Andreas115ORCID

Affiliation:

1. Fraunhofer Institute for Biomedical Engineering (IBMT), 66280 Sulzbach, Germany

2. Department of Reproduction Management, Leibniz Institute for Zoo and Wildlife Research (IZW), 10315 Berlin, Germany

3. Department of Neuroscience, FAIR Data Informatics Lab, University of California San Diego, San Diego, CA 92093, USA

4. SciCrunch Inc., San Diego, CA 92192, USA

5. Technology Platform Pluripotent Stem Cells, Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), 13125 Berlin, Germany

6. MRC Laboratory of Molecular Biology, Cambridge Biomedical Campus, Cambridge CB2 0QH, UK

7. Institute of Evolutionary Biology, Pompeu Fabra University—Spanish National Research Council, ICREA, 08003 Barcelona, Spain

8. Catalan Institution for Research and Advanced Studies (ICREA), 08010 Barcelona, Spain

9. Centro Nacional de Analisis Genomico (CNAG), 08028 Barcelona, Spain

10. Catalan Institute of Palaeontology Miquel Crusafont, Universitat Autònoma de Barcelona, 08193 Barcelona, Spain

11. European Molecular Biology Laboratory (EMBL) Barcelona, 08003 Barcelona, Spain

12. San Antonio Cellular Therapeutics Institute, University of Texas at San Antonio, San Antonio, TX 78249, USA

13. Department of General Pediatrics, Neonatology and Pediatric Cardiology, Duesseldorf University Hospital, Medical Faculty, Heinrich Heine University, 40225 Duesseldorf, Germany

14. Faculty of Veterinary Medicine, Free University of Berlin, 14163 Berlin, Germany

15. Berlin Institute of Health (BIH), Center for Regenerative Therapies (BCRT), 13353 Berlin, Germany

Abstract

The documentation, preservation and rescue of biological diversity increasingly uses living biological samples. Persistent associations between species, biosamples, such as tissues and cell lines, and the accompanying data are indispensable for using, exchanging and benefiting from these valuable materials. Explicit authentication of such biosamples by assigning unique and robust identifiers is therefore required to allow for unambiguous referencing, avoid identification conflicts and maintain reproducibility in research. A predefined nomenclature based on uniform rules would facilitate this process. However, such a nomenclature is currently lacking for animal biological material. We here present a first, standardized, human-readable nomenclature design, which is sufficient to generate unique and stable identifying names for animal cellular material with a focus on wildlife species. A species-specific human- and machine-readable syntax is included in the proposed standard naming scheme, allowing for the traceability of donated material and cultured cells, as well as data FAIRification. Only when it is consistently applied in the public domain, as publications and inter-institutional samples and data are exchanged, distributed and stored centrally, can the risks of misidentification and loss of traceability be mitigated. This innovative globally applicable identification system provides a standard for a sustainable structure for the long-term storage of animal bio-samples in cryobanks and hence facilitates current as well as future species conservation and biomedical research.

Funder

Horizon Europe Programme

German Federal Ministry of Education and Research

German Research Foundation

European Joint Programme for Rare Diseases

Publisher

MDPI AG

Reference74 articles.

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