Metabolomics for Clinical Biomarker Discovery and Therapeutic Target Identification

Author:

Lin Chunsheng1,Tian Qianqian2,Guo Sifan13,Xie Dandan3,Cai Ying13ORCID,Wang Zhibo13,Chu Hang4,Qiu Shi3,Tang Songqi3ORCID,Zhang Aihua13ORCID

Affiliation:

1. Graduate School and Second Affiliated Hospital, Heilongjiang University of Chinese Medicine, Harbin 150040, China

2. Faculty of Social Sciences, The University of Hong Kong, Hong Kong 999077, China

3. International Advanced Functional Omics Platform, Scientific Experiment Center, International Joint Research Center on Traditional Chinese and Modern Medicine, Hainan Engineering Research Center for Biological Sample Resources of Major Diseases (First Affiliated Hospital of Hainan Medical University), Key Laboratory of Tropical Cardiovascular Diseases Research of Hainan Province, Hainan Medical University, Xueyuan Road 3, Haikou 571199, China

4. Department of Biomedical Sciences, Beijing City University, Beijing 100193, China

Abstract

As links between genotype and phenotype, small-molecule metabolites are attractive biomarkers for disease diagnosis, prognosis, classification, drug screening and treatment, insight into understanding disease pathology and identifying potential targets. Metabolomics technology is crucial for discovering targets of small-molecule metabolites involved in disease phenotype. Mass spectrometry-based metabolomics has implemented in applications in various fields including target discovery, explanation of disease mechanisms and compound screening. It is used to analyze the physiological or pathological states of the organism by investigating the changes in endogenous small-molecule metabolites and associated metabolism from complex metabolic pathways in biological samples. The present review provides a critical update of high-throughput functional metabolomics techniques and diverse applications, and recommends the use of mass spectrometry-based metabolomics for discovering small-molecule metabolite signatures that provide valuable insights into metabolic targets. We also recommend using mass spectrometry-based metabolomics as a powerful tool for identifying and understanding metabolic patterns, metabolic targets and for efficacy evaluation of herbal medicine.

Funder

Program of Natural Science Foundation of State

Hainan Provincial Department of Science and Technology

Natural Science Foundation of Heilongjiang Province

Publisher

MDPI AG

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