Bioinformatic Workflows for Generating Complete Plastid Genome Sequences—An Example from Cabomba (Cabombaceae) in the Context of the Phylogenomic Analysis of the Water-Lily Clade-Reference-Cited by-同舟云学术

Bioinformatic Workflows for Generating Complete Plastid Genome Sequences—An Example from Cabomba (Cabombaceae) in the Context of the Phylogenomic Analysis of the Water-Lily Clade

Published:2018-06-21 Issue:3 Volume:8 Page:25
ISSN:2075-1729
Container-title:Life
language:en
Short-container-title:Life

Author:

Gruenstaeudl Michael,Gerschler Nico^ORCID,Borsch Thomas

Publisher

MDPI AG

Subject

Paleontology,Space and Planetary Science,General Biochemistry, Genetics and Molecular Biology,Ecology, Evolution, Behavior and Systematics

Link

http://www.mdpi.com/2075-1729/8/3/25/pdf

Reference80 articles.

1. Plastid genome sequencing, comparative genomics, and phylogenomics: Current status and prospects

2. From algae to angiosperms–inferring the phylogeny of green plants (Viridiplantae) from 360 plastid genomes

3. The Origin of Land Plants: A Phylogenomic Perspective

4. Plastid phylogenomics and molecular evolution of Alismatales

5. Another look at the phylogenetic position of the grape order Vitales: Chloroplast phylogenomics with an expanded sampling of key lineages

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1. On the importance of sequence alignment inspections in plastid phylogenomics – an example from revisiting the relationships of the water‐lilies;Cladistics;2024-05-18

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3. The complete plastid genome sequence of Chloranthus fortunei (A. Gray) Solms-Laub. in Chloranthaceae;Mitochondrial DNA Part B;2022-10-03

4. Software Choice and Sequencing Coverage Can Impact Plastid Genome Assembly–A Case Study in the Narrow Endemic Calligonum bakuense;Frontiers in Plant Science;2022-07-06

5. Depth and evenness of sequence coverage are associated with assembly quality, genome structure, and choice of sequencing platform in archived plastid genomes;2022-05-06