Aptamer-Based Point-of-Care Devices: Emerging Technologies and Integration of Computational Methods

Author:

Aslan Yusuf12,Atabay Maryam13ORCID,Chowdhury Hussain Kawsar12ORCID,Göktürk Ilgım13ORCID,Saylan Yeşeren3ORCID,Inci Fatih12ORCID

Affiliation:

1. UNAM—National Nanotechnology Research Center, Bilkent University, Ankara 06800, Turkey

2. Institute of Materials Science and Nanotechnology, Bilkent University, Ankara 06800, Turkey

3. Department of Chemistry, Hacettepe University, Ankara 06800, Turkey

Abstract

Recent innovations in point-of-care (POC) diagnostic technologies have paved a critical road for the improved application of biomedicine through the deployment of accurate and affordable programs into resource-scarce settings. The utilization of antibodies as a bio-recognition element in POC devices is currently limited due to obstacles associated with cost and production, impeding its widespread adoption. One promising alternative, on the other hand, is aptamer integration, i.e., short sequences of single-stranded DNA and RNA structures. The advantageous properties of these molecules are as follows: small molecular size, amenability to chemical modification, low- or nonimmunogenic characteristics, and their reproducibility within a short generation time. The utilization of these aforementioned features is critical in developing sensitive and portable POC systems. Furthermore, the deficiencies related to past experimental efforts to improve biosensor schematics, including the design of biorecognition elements, can be tackled with the integration of computational tools. These complementary tools enable the prediction of the reliability and functionality of the molecular structure of aptamers. In this review, we have overviewed the usage of aptamers in the development of novel and portable POC devices, in addition to highlighting the insights that simulations and other computational methods can provide into the use of aptamer modeling for POC integration.

Funder

Scientific and Technological Research Council of Turkey (TÜBİTAK), the 2232 International Fellowship for Outstanding Researchers

Turkish Academy of Sciences Outstanding Young Scientists Award Program

Young Scientist Awards Program (BAGEP) award from the Science Academy

TÜBİTAK 2247-D National Early-Stage Researchers Program

Publisher

MDPI AG

Subject

Clinical Biochemistry,General Medicine,Analytical Chemistry,Biotechnology,Instrumentation,Biomedical Engineering,Engineering (miscellaneous)

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