Transcriptome Profiling of Etridiazole-Exposed Zebrafish (Danio rerio) Embryos Reveals Pathways Associated with Cardiac and Ocular Toxicities
-
Published:2023-10-11
Issue:20
Volume:24
Page:15067
-
ISSN:1422-0067
-
Container-title:International Journal of Molecular Sciences
-
language:en
-
Short-container-title:IJMS
Author:
Vasamsetti Bala Murali Krishna1ORCID, Chon Kyongmi1, Yoon Chang-Young1, Kim Juyeong1, Choi Ji-Yeong1, Hwang Sojeong1, Park Kyeong-Hun1
Affiliation:
1. Toxicity and Risk Assessment Division, Department of Agro-Food Safety and Crop Protection, National Institute of Agricultural Sciences, Rural Development Administration, Iseo-myeon, Wanju-gun 55365, Jeollabuk-do, Republic of Korea
Abstract
Etridiazole (EDZ) is a thiadiazole-containing fungicide commonly used to control Pythium and Phytophthora spp. Although previous studies have shown that EDZ is teratogenic, the exact molecular mechanisms underlying its toxicity remain unknown. In this study, a zebrafish (Danio rerio; ZF) model was used to explore the molecular pathways associated with EDZ toxicity. The whole transcriptome of ZF embryos exposed to 96 h of EDZ was analyzed, along with developmental abnormalities. EDZ-induced malformations were primarily related to the eyes, heart, and growth of the ZF. Compared to untreated ZF, etridiazole-treated ZF had 2882 differentially expressed genes (DEGs), consisting of 1651 downregulated genes and 1231 upregulated genes. Gene ontology enrichment analysis showed that DEGs were involved in biological processes, such as sensory perception, visual perception, sensory organ development, and visual system development, and showed transmembrane transporter and peptidase regulator activities. Metabolism, phototransduction, aminoacyl-tRNA biosynthesis, MAPK signaling pathway, calcium signaling pathway, and vascular smooth muscle contraction were among the most enriched KEGG pathways. The qPCR analyses of the eight random genes were in good agreement with the transcriptome data. These results suggest several putative mechanisms underlying EDZ-induced developmental deformities in ZF.
Funder
Research Program for Agriculture Science and Technology Development National Institute of Agricultural Sciences, Rural Development Administration, Republic of Korea 2023 the RDA Fellowship Program of the National Institute of Agricultural Sciences, Rural Development Administration, Republic of Korea
Subject
Inorganic Chemistry,Organic Chemistry,Physical and Theoretical Chemistry,Computer Science Applications,Spectroscopy,Molecular Biology,General Medicine,Catalysis
Reference56 articles.
1. Zhan, W., Zhou, R., Mao, P., Yuan, C., Zhang, T., Liu, Y., Tian, J., Wang, H., and Xue, W. (2023). Synthesis, antifungal activity and mechanism of action of novel chalcone derivatives containing 1,2,4-triazolo-[3,4-b]-1,3,4-thiadiazole. Mol. Divers., 1–14. 2. Kalinina, T.A., Balandina, V.I., Obydennov, K.L., Slepukhin, P.A., Fan, Z., Bakulev, V.A., and Glukhareva, T.V. (2023). Synthesis, Fungicidal Activity and Plant Protective Properties of 1, 2, 3-Thiadiazole and Isothiazole-Based N-acyl-N-arylalaninates. Molecules, 28. 3. RED (2023, October 04). Etridiazole (Terrazole ®). US EPA 738-R-00-019, Available online: https://www3.epa.gov/pesticides/chem_search/reg_actions/reregistration/red_PC-084701_1-Sep-00.pdf. 4. Gas-phase concentrations of current-use pesticides in Iowa;Peck;Environ. Sci. Technol.,2005 5. National Center for Biotechnology Information (2023, August 15). PubChem Compound Summary for CID 17432, Etridiazole, Available online: https://pubchem.ncbi.nlm.nih.gov/compound/Etridiazole.
Cited by
3 articles.
订阅此论文施引文献
订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献
|
|