A Comprehensive Insight and In Silico Analysis of CircRNAs in Hepatocellular Carcinoma: A Step toward ncRNA-Based Precision Medicine

Author:

Youness Rana A.1ORCID,Hassan Hossam A.1ORCID,Abaza Tasneem12ORCID,Hady Ahmed A.3ORCID,El Magdoub Hekmat M.4,Ali Mohamed56ORCID,Vogel Johannes7,Thiersch Markus7ORCID,Gassmann Max7ORCID,Hamdy Nadia M.8ORCID,Aboouf Mostafa A.78ORCID

Affiliation:

1. Molecular Genetics Research Team (MGRT), Molecular Biology and Biochemistry Department, Faculty of Biotechnology, German International University (GIU), Cairo 11835, Egypt

2. Biotechnology Program, Institute of Basic and Applied Sciences (BAS), Egypt-Japan University of Science and Technology (E-JUST), New Borg El-Arab City 21934, Egypt

3. Clinical Oncology Department, Faculty of Medicine, Mansoura University, Mansoura 35511, Egypt

4. Biochemistry Department, Faculty of Pharmacy, Misr International University, Cairo 19648, Egypt

5. Department of Obstetrics and Gynecology, University of Chicago, Chicago, IL 60637, USA

6. Clinical Pharmacy Department, Faculty of Pharmacy, Ain Shams University, Cairo 11566, Egypt

7. Zurich Center for Integrative Human Physiology and Institute of V. Physiology, University of Zurich, 8057 Zurich, Switzerland

8. Biochemistry Department, Faculty of Pharmacy, Ain Shams University, Abassia, Cairo 11566, Egypt

Abstract

Circular RNAs (circRNAs) are cardinal players in numerous physiological and pathological processes. CircRNAs play dual roles as tumor suppressors and oncogenes in different oncological contexts, including hepatocellular carcinoma (HCC). Their roles significantly impact the disease at all stages, including initiation, development, progression, invasion, and metastasis, in addition to the response to treatment. In this review, we discuss the biogenesis and regulatory functional roles of circRNAs, as well as circRNA–protein–mRNA ternary complex formation, elucidating the intricate pathways tuned by circRNAs to modulate gene expression and cellular processes through a comprehensive literature search, in silico search, and bioinformatics analysis. With a particular focus on the interplay between circRNAs, epigenetics, and HCC pathology, the article sets the stage for further exploration of circRNAs as novel investigational theranostic agents in the dynamic realm of HCC.

Publisher

MDPI AG

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