Deep Learning Empowers Endoscopic Detection and Polyps Classification: A Multiple-Hospital Study

Author:

Shen Ming-Hung12,Huang Chi-Cheng34,Chen Yu-Tsung5,Tsai Yi-Jian67,Liou Fou-Ming8,Chang Shih-Chang9,Phan Nam Nhut10

Affiliation:

1. Department of Surgery, Fu Jen Catholic University Hospital, Fu Jen Catholic University, New Taipei City 24205, Taiwan

2. School of Medicine, College of Medicine, Fu Jen Catholic University, New Taipei City 24205, Taiwan

3. Department of Surgery, Taipei Veterans General Hospital, Taipei City 11217, Taiwan

4. Institute of Epidemiology and Preventive Medicine, College of Public Health, National Taiwan University, Taipei City 10663, Taiwan

5. Department of Internal Medicine, Fu Jen Catholic University Hospital, New Taipei City 24205, Taiwan

6. Division of Colorectal Surgery, Department of Surgery, Fu Jen Catholic University Hospital, New Taipei City 24205, Taiwan

7. Graduate Institute of Biomedical Electronics and Bioinformatics, Department of Electrical Engineering, National Taiwan University, Taipei City 10663, Taiwan

8. ASUSTeK Computer Inc., Taipei City 11259, Taiwan

9. Division of Colorectal Surgery, Department of Surgery, Cathay General Hospital, Taipei City 106443, Taiwan

10. Bioinformatics and Biostatistics Core, Centre of Genomic and Precision Medicine, National Taiwan University, Taipei City 10055, Taiwan

Abstract

The present study aimed to develop an AI-based system for the detection and classification of polyps using colonoscopy images. A total of about 256,220 colonoscopy images from 5000 colorectal cancer patients were collected and processed. We used the CNN model for polyp detection and the EfficientNet-b0 model for polyp classification. Data were partitioned into training, validation and testing sets, with a 70%, 15% and 15% ratio, respectively. After the model was trained/validated/tested, to evaluate its performance rigorously, we conducted a further external validation using both prospective (n = 150) and retrospective (n = 385) approaches for data collection from 3 hospitals. The deep learning model performance with the testing set reached a state-of-the-art sensitivity and specificity of 0.9709 (95% CI: 0.9646–0.9757) and 0.9701 (95% CI: 0.9663–0.9749), respectively, for polyp detection. The polyp classification model attained an AUC of 0.9989 (95% CI: 0.9954–1.00). The external validation from 3 hospital results achieved 0.9516 (95% CI: 0.9295–0.9670) with the lesion-based sensitivity and a frame-based specificity of 0.9720 (95% CI: 0.9713–0.9726) for polyp detection. The model achieved an AUC of 0.9521 (95% CI: 0.9308–0.9734) for polyp classification. The high-performance, deep-learning-based system could be used in clinical practice to facilitate rapid, efficient and reliable decisions by physicians and endoscopists.

Funder

ASUSTeK Computer Inc.

Publisher

MDPI AG

Subject

Clinical Biochemistry

Reference48 articles.

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5. Health Promotion Administration (2019, December 25). Ministry of Health and Welfare. Cancer Registry Annual Report, Available online: https://www.hpa.gov.tw/Pages/ashx/File.ashx?FilePath=%7E/File/Attach/7425/File_6951.pdf.

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