Four Transformer-Based Deep Learning Classifiers Embedded with an Attention U-Net-Based Lung Segmenter and Layer-Wise Relevance Propagation-Based Heatmaps for COVID-19 X-ray Scans

Author:

Gupta Siddharth1,Dubey Arun K.2,Singh Rajesh3,Kalra Mannudeep K.4,Abraham Ajith5,Kumari Vandana6ORCID,Laird John R.7,Al-Maini Mustafa8,Gupta Neha2,Singh Inder9,Viskovic Klaudija10,Saba Luca11ORCID,Suri Jasjit S.11121314

Affiliation:

1. Department of Computer Science and Engineering, Bharati Vidyapeeth’s College of Engineering, New Delhi 110063, India

2. Department of Information Technology, Bharati Vidyapeeth’s College of Engineering, New Delhi 110063, India

3. Department of Research and Innovation, Uttaranchal Institute of Technology, Uttaranchal University, Dehradun 248007, India

4. Department of Radiology, Massachusetts General Hospital, 55 Fruit Street, Boston, MA 02114, USA

5. Department of Computer Science, Bennett University, Greater Noida 201310, India

6. School of Computer Science and Engineering, Galgotias University, Greater Noida 201310, India

7. Heart and Vascular Institute, Adventist Health St. Helena, St. Helena, CA 94574, USA

8. Allergy, Clinical Immunology and Rheumatology Institute, Toronto, ON M5G 1N8, Canada

9. Department of Radiology and Ultrasound, University Hospital for Infectious Diseases, 10000 Zagreb, Croatia

10. Department of Radiology, Azienda Ospedaliero Universitaria (A.O.U.), 09100 Cagliari, Italy

11. Department of ECE, Idaho State University, Pocatello, ID 83209, USA

12. Stroke Diagnostics and Monitoring Division, AtheroPoint™, Roseville, CA 95661, USA

13. Department of Computer Engineering, Graphic Era (Deemed to be University), Dehradun 248002, India

14. Department of Computer Science & Engineering, Symbiosis Institute of Technology, Nagpur Campus 440008, Symbiosis International (Deemed University), Pune 412115, India

Abstract

Background: Diagnosing lung diseases accurately is crucial for proper treatment. Convolutional neural networks (CNNs) have advanced medical image processing, but challenges remain in their accurate explainability and reliability. This study combines U-Net with attention and Vision Transformers (ViTs) to enhance lung disease segmentation and classification. We hypothesize that Attention U-Net will enhance segmentation accuracy and that ViTs will improve classification performance. The explainability methodologies will shed light on model decision-making processes, aiding in clinical acceptance. Methodology: A comparative approach was used to evaluate deep learning models for segmenting and classifying lung illnesses using chest X-rays. The Attention U-Net model is used for segmentation, and architectures consisting of four CNNs and four ViTs were investigated for classification. Methods like Gradient-weighted Class Activation Mapping plus plus (Grad-CAM++) and Layer-wise Relevance Propagation (LRP) provide explainability by identifying crucial areas influencing model decisions. Results: The results support the conclusion that ViTs are outstanding in identifying lung disorders. Attention U-Net obtained a Dice Coefficient of 98.54% and a Jaccard Index of 97.12%. ViTs outperformed CNNs in classification tasks by 9.26%, reaching an accuracy of 98.52% with MobileViT. An 8.3% increase in accuracy was seen while moving from raw data classification to segmented image classification. Techniques like Grad-CAM++ and LRP provided insights into the decision-making processes of the models. Conclusions: This study highlights the benefits of integrating Attention U-Net and ViTs for analyzing lung diseases, demonstrating their importance in clinical settings. Emphasizing explainability clarifies deep learning processes, enhancing confidence in AI solutions and perhaps enhancing clinical acceptance for improved healthcare results.

Publisher

MDPI AG

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