Affiliation:
1. Department of Aquatic Life Medicine, Pukyong National University, Busan 48513, Republic of Korea
Abstract
Iron flocculation is widely used to concentrate viruses in water, followed by Fe-virus flocculate formation, collection, and elution. In the elution stage, an oxalic or ascorbic acid re-suspension buffer dissolved iron hydroxide. After the concentration of viral hemorrhagic septicemia virus (VHSV) in seawater (1 × 101 to 1 × 105 viral genome copies or plaque-forming unit (PFU)/mL), the recovery yield of the viral genome using quantitative real-time PCR (qRT-PCR) and viral infectivity using the plaque assay were investigated to evaluate the validity of the two re-suspension buffers to concentrate VHSV. The mean viral genome recovery yield with oxalic and ascorbic acid was 71.2 ± 12.3% and 81.4 ± 9.5%, respectively. The mean viral infective recovery yields based on the PFU were significantly different between the two buffers at 23.8 ± 22.7% (oxalic acid) and 4.4 ± 2.7% (ascorbic acid). Notably, although oxalic acid maintains viral infectivity over 60% at a viral concentration above 105 PFU/mL, the infective VHSVs were not sufficiently recovered at a low viral concentration (102 PFU/mL, <10%). To support this result, concentrated VHSV was inoculated in Epithelioma papulosum cyprini (EPC) cells to confirm cell viability, viral gene expression, and extracellular viral titer. All results demonstrated that oxalic acid buffer was superior to ascorbic acid buffer in preserving viral infectivity.
Funder
Pukyong National University
Subject
General Veterinary,Animal Science and Zoology
Reference41 articles.
1. Environmental DNA-derived pathogen gene sequences can expand surveillance when pathogen titers are decoupled in eDNA and hosts;Kaganer;Environ. DNA,2021
2. Application of environmental DNA for monitoring Red Sea bream Iridovirus at a fish farm;Kawato;Microbiol. Spectr.,2021
3. Polyethylene glycol precipitation for recovery of pathogenic viruses, including hepatitis A virus and human rotavirus, from oyster, water, and sediment samples;Lewis;Appl. Environ. Microbiol.,1988
4. Concentration of infectious aquatic rhabdoviruses from freshwater and seawater using ultrafiltration;Grant;J. Aquat. Anim. Health,2011
5. Wommack, K.E., Sime-Ngando, T., Winget, D.M., Jamindar, S., and Helton, R.R. (2010). Manual of Aquatic Viral Ecology (MAVE), Advancing the Science for Limnology and Oceanography (ASLO).
Cited by
3 articles.
订阅此论文施引文献
订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献