CVD Graphene Electrode for Direct Electrochemical Detection of Double-Stranded DNA

Author:

Bardaoui Afrah1ORCID,Hammami Asma1,Elkarous Rabiaa1,Ali Aloui Mohamed1,Oueslati Rania1,Messaoud Olfa2ORCID,Santos Diogo M. F.3ORCID,Chtourou Radhouane1

Affiliation:

1. Research and Technology Center of Energy, Laboratory of Nanomaterials and Renewable Energy Systems, Borj-Cedria Science and Technology Park, BP 95, Hammam-Lif 2050, Tunisia

2. Biomedical Genomics and Oncogenetics Laboratory, Institut Pasteur de Tunis, University Tunis El Manar, Tunis 1068, Tunisia

3. Center of Physics and Engineering of Advanced Materials, Laboratory for Physics of Materials and Emerging Technologies, Chemical Engineering Department, Instituto Superior Técnico, Universidade de Lisboa, 1049-001 Lisbon, Portugal

Abstract

Understanding and regulating DNA interactions with solvents and redox-active centers opens up new possibilities for improving electrochemical signals and developing adequate biosensors. This work reports the development of a modified indium tin oxide (ITO) electrode by chemical vapor deposition (CVD) of graphene for the detection of double-stranded DNA. The modified electrode shows a better electrical conductivity than ITO, as confirmed by electrochemical impedance spectroscopy (EIS), where a drastic decrease in the charge–transfer resistance, Rct, from ~320 to ~60 Ω was observed. Sequences of double-stranded genomic DNA with a different number of base pairs are evaluated through differential pulse voltammetry (DPV), using ferri/ferrocyanide ([Fe(CN)6]3−/4−) as a mediator in the solution. Variations in the electrochemical response of the [Fe(CN)6]3−/4− probe are observed after introducing redox inactive double-stranded DNA ions. The redox-active [Fe(CN)6]3−/4− probe serves as a scaffold to bring DNA into the graphene-modified ITO electrode surface, provoking an increase in the current and a change in the potential when the number of base pairs increases. These results are confirmed by EIS, which shows a variation in the Rct. The calibration of DPV intensity and Rct vs. DNA base pairs (bps) number were linear in the 495–607 bps range. The proposed method could replace the nucleic acid gel electrophoresis technique to determine the presence of a DNA fragment and quantify its size.

Funder

Arab-German Young Academy of Sciences and Humanities

Fundação para a Ciência e a Tecnologia

Publisher

MDPI AG

Subject

Inorganic Chemistry

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