Patient-Derived Models of Cancer in the NCI PDMC Consortium: Selection, Pitfalls, and Practical Recommendations

Author:

Habowski Amber N.1ORCID,Budagavi Deepthi P.1,Scherer Sandra D.2ORCID,Aurora Arin B.3,Caligiuri Giuseppina1,Flynn William F.4,Langer Ellen M.5,Brody Jonathan R.6,Sears Rosalie C.7ORCID,Foggetti Giorgia8ORCID,Arnal Estape Anna9ORCID,Nguyen Don X.10,Politi Katerina A.10,Shen Xiling11,Hsu David S.12,Peehl Donna M.13,Kurhanewicz John13ORCID,Sriram Renuka13ORCID,Suarez Milagros14,Xiao Sophie14,Du Yuchen14,Li Xiao-Nan14,Navone Nora M.15ORCID,Labanca Estefania15,Willey Christopher D.16ORCID

Affiliation:

1. Cold Spring Harbor Laboratory, Long Island, NY 11724, USA

2. Department of Oncologic Sciences, Huntsman Cancer Institute, University of Utah, Salt Lake City, UT 84112, USA

3. Children’s Research Institute and Department of Pediatrics, University of Texas Southwestern, Dallas, TX 75235, USA

4. Jackson Laboratory, Farmington, CT 06032, USA

5. Division of Oncological Sciences, Oregon Health & Science University, Portland, OR 97239, USA

6. Department of Surgery, Oregon Health & Science University, Portland, OR 97239, USA

7. Department of Molecular and Medical Genetics, Oregon Health & Science University, Portland, OR 97239, USA

8. Ospedale San Raffaele, 20054 Milano, Italy

9. Department of Internal Medicine, Yale University, New Haven, CT 06520, USA

10. Department of Pathology, Yale University, New Haven, CT 06520, USA

11. Terasaki Institute for Biomedical Innovation, Los Angeles, CA 90024, USA

12. Department of Medicine, Duke University, Durham, NC 27710, USA

13. Department of Radiology and Biomedical Imaging, University of California, San Francisco, CA 94158, USA

14. Department of Pediatrics, Lurie Children’s Hospital of Chicago Northwestern University, Chicago, IL 60611, USA

15. Department of Genitourinary Medical Oncology, David H. Koch Center for Applied Research of Genitourinary Cancers, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA

16. Department of Radiation Oncology, University of Alabama at Birmingham, Birmingham, AL 35233, USA

Abstract

For over a century, early researchers sought to study biological organisms in a laboratory setting, leading to the generation of both in vitro and in vivo model systems. Patient-derived models of cancer (PDMCs) have more recently come to the forefront of preclinical cancer models and are even finding their way into clinical practice as part of functional precision medicine programs. The PDMC Consortium, supported by the Division of Cancer Biology in the National Cancer Institute of the National Institutes of Health, seeks to understand the biological principles that govern the various PDMC behaviors, particularly in response to perturbagens, such as cancer therapeutics. Based on collective experience from the consortium groups, we provide insight regarding PDMCs established both in vitro and in vivo, with a focus on practical matters related to developing and maintaining key cancer models through a series of vignettes. Although every model has the potential to offer valuable insights, the choice of the right model should be guided by the research question. However, recognizing the inherent constraints in each model is crucial. Our objective here is to delineate the strengths and limitations of each model as established by individual vignettes. Further advances in PDMCs and the development of novel model systems will enable us to better understand human biology and improve the study of human pathology in the lab.

Funder

Cold Spring Harbor Laboratory

Publisher

MDPI AG

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