The sensitivity of network statistics to incomplete electrode sampling on intracranial EEG

Author:

Conrad Erin C.12,Bernabei John M.23,Kini Lohith G.23,Shah Preya23,Mikhail Fadi12,Kheder Ammar4,Shinohara Russell T.567,Davis Kathryn A.12,Bassett Danielle S.138910,Litt Brian12311

Affiliation:

1. Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA, USA

2. Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA, USA

3. Department of Bioengineering, School of Engineering and Applied Science, University of Pennsylvania, Philadelphia, PA, USA

4. Department of Neurology, Emory University, Atlanta, GA, USA

5. Department of Biostatistics, Epidemiology, and Informatics, University of Pennsylvania, Philadelphia, PA, USA

6. Penn Statistics in Imaging and Visualization Center, University of Pennsylvania, Philadelphia, PA, USA

7. Center for Biomedical Image Computing and Analytics, University of Pennsylvania, Philadelphia, PA, USA

8. Department of Electrical and Systems Engineering, School of Engineering and Applied Science, University of Pennsylvania, Philadelphia, PA, USA

9. Department of Physics and Astronomy, College of Arts and Sciences, University of Pennsylvania, Philadelphia, PA, USA

10. Department of Psychiatry, Hospital of the University of Pennsylvania, Philadelphia, PA, USA

11. Department of Neurosurgery, Hospital of the University of Pennsylvania, Philadelphia, PA, USA

Abstract

Network neuroscience applied to epilepsy holds promise to map pathological networks, localize seizure generators, and inform targeted interventions to control seizures. However, incomplete sampling of the epileptic brain because of sparse placement of intracranial electrodes may affect model results. In this study, we evaluate the sensitivity of several published network measures to incomplete spatial sampling and propose an algorithm using network subsampling to determine confidence in model results. We retrospectively evaluated intracranial EEG data from 28 patients implanted with grid, strip, and depth electrodes during evaluation for epilepsy surgery. We recalculated global and local network metrics after randomly and systematically removing subsets of intracranial EEG electrode contacts. We found that sensitivity to incomplete sampling varied significantly across network metrics. This sensitivity was largely independent of whether seizure onset zone contacts were targeted or spared from removal. We present an algorithm using random subsampling to compute patient-specific confidence intervals for network localizations. Our findings highlight the difference in robustness between commonly used network metrics and provide tools to assess confidence in intracranial network localization. We present these techniques as an important step toward translating personalized network models of seizures into rigorous, quantitative approaches to invasive therapy.

Funder

National Institute of Neurological Disorders and Stroke

Mirowski Family Foundation

Neil and Barbara Smit

Jonathan Rothberg

Thornton Foundation

Alfred P. Sloan Foundation

John D. and Catherine T. MacArthur Foundation

National Institutes of Health

ISI Foundation

National Multiple Sclerosis Society

Race to Erase MS

Institute for Translational Medicine and Therapeutics

Publisher

MIT Press - Journals

Subject

Applied Mathematics,Artificial Intelligence,Computer Science Applications,General Neuroscience

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