High-resolution diffusion imaging in the unfixed post-mortem infant brain at 7 T

Author:

Wu Wenchuan1,Rieger Sebastian W.2,Baxter Luke13,Adams Eleri34,Andersson Jesper L.R.1,Cobo Maria M.35,Andritsou Foteini3,Bastiani Matteo167,Fry Ria Evans3,Frost Robert89,Fitzgibbon Sean1,Foxley Sean10,Fowler Darren3,Gallagher Chris1,Howard Amy F.D.1,Hajnal Joseph V.1112,Moultrie Fiona3,Monk Vaneesha3,Porter David Andrew13,Papp Daniel1,Price Anthony1112,Sallet Jerome1415,Sanders Michael1,Wilkinson Dominic1617,Slater Rebeccah13,Miller Karla L.1

Affiliation:

1. Wellcome Centre for Integrative Neuroimaging, FMRIB, Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford, United Kingdom

2. Oxford Centre for Human Brain Activity, Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of Oxford, Oxford, United Kingdom

3. Department of Paediatrics, University of Oxford, Oxford, United Kingdom

4. Newborn Care Unit, John Radcliffe Hospital, Oxford University Hospitals NHS Foundation Trust, Oxford, United Kingdom

5. Universidad San Francisco de Quito USFQ, Colegio de Ciencias Biologicas y Ambientales, Quito, Ecuador

6. Sir Peter Mansfield Imaging Centre, School of Medicine, University of Nottingham, Nottingham, United Kingdom

7. NIHR Biomedical Research Centre, University of Nottingham, Nottingham, United Kingdom

8. Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, MA, United States

9. Department of Radiology, Harvard Medical School, Boston, MA, United States

10. Department of Radiology, University of Chicago, Chicago, IL, United States

11. Centre for the Developing Brain, School of Biomedical Engineering and Imaging Sciences, King’s College London, King’s Health Partners, St. Thomas’ Hospital, London, United Kingdom

12. Department of Biomedical Engineering, School of Biomedical Engineering and Imaging Sciences, King’s College London, King’s Health Partners, St. Thomas’ Hospital, London, United Kingdom

13. Imaging Centre of Excellence, College of Medical, Veterinary & Life Sciences, University of Glasgow, Glasgow, United Kingdom

14. Department of Experimental Psychology, University of Oxford, Oxford, United Kingdom

15. Univ Lyon, Université Lyon 1, Inserm, Stem Cell and Brain Research Institute U1208, Bron, France

16. Oxford Uehiro Centre for Practical Ethics, Oxford, United Kingdom

17. John Radcliffe Hospital, Oxford, United Kingdom

Abstract

Abstract Diffusion MRI of the infant brain allows investigation of the organizational structure of maturing fibers during brain development. Post-mortem imaging has the potential to achieve high resolution by using long scan times, enabling precise assessment of small structures. Technical development for post-mortem diffusion MRI has primarily focused on scanning of fixed tissue, which is robust to effects like temperature drift that can cause unfixed tissue to degrade. The ability to scan unfixed tissue in the intact body would enable post-mortem studies without organ donation, but poses new technical challenges. This paper describes our approach to scan setup, protocol optimization, and tissue protection in the context of the Developing Human Connectome Project (dHCP) of neonates. A major consideration was the need to preserve the integrity of unfixed tissue during scanning in light of energy deposition at ultra-high magnetic field strength. We present results from one of the first two subjects recruited to the study, who died on postnatal day 46 at 29+6 weeks postmenstrual age, demonstrating high-quality diffusion MRI data. We find altered diffusion properties consistent with post-mortem changes reported previously. Preliminary voxel-wise and tractography analyses are presented with comparison to age-matched in vivo dHCP data. These results show that high-quality, high-resolution post-mortem data of unfixed tissue can be acquired to explore the developing human brain.

Publisher

MIT Press

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