Antimicrobial framework nucleic acid‐based DNAzyme cluster with high catalytic efficiency

Author:

Afshan Noshin12,Tariq Ruba3,Riaz Iqra3,Manan Abdul3,Iqbal Azhar3,Ejaz Muhammad3,Sohail Amir3,Bari Alina4,Mahmood Sajid56ORCID,Iqbal Shahid5ORCID,Alotaibi Khalid M7,Alshalwi Matar7

Affiliation:

1. School of Life Sciences, Medical Science and Technology Innovation Center Shandong First Medical University and Shandong Academy of Medical Sciences Jinan China

2. Department of Chemistry, Faculty of Science and Technology Government College Women University Faisalabad Faisalabad Pakistan

3. Department of Chemistry, Faculty of Engineering and Applied Sciences Riphah International University Faisalabad Faisalabad Pakistan

4. Department of Chemistry and Chemical Engineering Anhui Normal University Wuhu China

5. Nottingham Ningbo China Beacons of Excellence Research and Innovation Institute University of Nottingham Ningbo China

6. Functional Materials Group Gulf University for Science and Technology Mishref Kuwait

7. Department of Chemistry, College of Science King Saud University Riyadh Saudi Arabia

Abstract

AbstractBACKGROUNDHydroxyl radical‐mediated materials primarily liberate more reactive and acutely lethal hydroxyl radical (OH) and act as potent bactericidal antibiotics, for example H2O2. Hydroxyl radical possess higher tendency than that of H2O2 to attack various biological molecules such as DNA, proteins and iron–sulfur clusters, and impair their proper functioning, actively leading to strongly potent bactericidal effect. To acquire the desired antimicrobial effect, high concentration of H2O2 is required that has found medically harmful to healthy tissues of humans.RESULTSWe herein report framework nucleic acid‐regulated DNAzyme cluster (FDC) – that is, peroxidase‐like hemin‐bound G‐quadruplex (G4/H) DNAzyme – to amplify the catalytic reduction potential of G4/H complex, leading to high conversion rate of H2O2 to more reactive hydroxyl radical that potentially shows the same antibacterial efficiency at lower and safer H2O2 concentration. Specifically, we have grafted multiple copies of DNAzymes outside framework nucleic acid (FNA) to successively achieve 3–9 orders of magnitude enhancement in catalytic activity and antibacterial efficiency of FDC.CONCLUSIONOur designed FDC has successfully alleviated H2O2 toxicity and increased its efficiency as antibacterial material, as FDC amplified the catalytic reduction potential of G4/H DNAzyme, leading to high conversion rate of H2O2 to more reactive OH that potentially shows the same antibacterial efficiency at lower and safer H2O2 concentration. © 2024 Society of Chemical Industry (SCI).

Funder

King Saud University

Publisher

Wiley

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