Graphical modeling of causal factors associated with the postoperative survival of esophageal cancer subjects

Author:

Ren Shangsi1,Beeche Cameron A.1,Iyer Kartik1,Shi Zhiyi1,Auster Quentin1,Hawkins James M.1,Leader Joseph K.1,Dhupar Rajeev23,Pu Jiantao14

Affiliation:

1. Department of Radiology University of Pittsburgh Pittsburgh Pennsylvania USA

2. Department of Cardiothoracic Surgery Division of Thoracic and Foregut Surgery University of Pittsburgh Pittsburgh Pennsylvania USA

3. Surgical Services Division Thoracic Surgery VA Pittsburgh Healthcare System Pittsburgh Pennsylvania USA

4. Department of Bioengineering University of Pittsburgh Pittsburgh Pennsylvania USA

Abstract

AbstractPurposeTo clarify the causal relationship between factors contributing to the postoperative survival of patients with esophageal cancer.MethodsA cohort of 195 patients who underwent surgery for esophageal cancer between 2008 and 2021 was used in the study. All patients had preoperative chest computed tomography (CT) and positron emission tomography‐CT (PET‐CT) scans prior to receiving any treatment. From these images, high throughput and quantitative radiomic features, tumor features, and various body composition features were automatically extracted. Causal relationships among these image features, patient demographics, and other clinicopathological variables were analyzed and visualized using a novel score‐based directed graph called “Grouped Greedy Equivalence Search” (GGES) while taking prior knowledge into consideration. After supplementing and screening the causal variables, the intervention do‐calculus adjustment (IDA) scores were calculated to determine the degree of impact of each variable on survival. Based on this IDA score, a GGES prediction formula was generated. Ten‐fold cross‐validation was used to assess the performance of the models. The prediction results were evaluated using the R‐Squared Score (R2 score).ResultsThe final causal graphical model was formed by two PET‐based image variables, ten body composition variables, four pathological variables, four demographic variables, two tumor variables, and one radiological variable (Percentile 10). Intramuscular fat mass was found to have the most impact on overall survival month. Percentile 10 and overall TNM (T: tumor, N: nodes, M: metastasis) stage were identified as direct causes of overall survival (month). The GGES casual model outperformed GES in regression prediction (R2 = 0.251) (p < 0.05) and was able to avoid unreasonable causality that may contradict common sense.ConclusionThe GGES causal model can provide a reliable and straightforward representation of the intricate causal relationships among the variables that impact the postoperative survival of patients with esophageal cancer.

Funder

National Institutes of Health

Publisher

Wiley

Subject

General Medicine

Reference45 articles.

1. Overview of esophageal cancer

2. Surveillance E and End Results (SEER) Program.Cancer Stat Facts: Esophageal Cancer National Cancer Institute at the National Institutes of Health.https://seer.cancer.gov/statfacts/html/esoph.html

3. Paucigranulocytic asthma: Uncoupling of airway obstruction from inflammation

4. Temporal Trends in Long-Term Survival and Cure Rates in Esophageal Cancer: A SEER Database Analysis

5. Trends in esophageal cancer survival in United States adults from 1973 to 2009: A SEER database analysis

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3