A community‐endorsed open‐source lexicon for contrast agent–based perfusion MRI: A consensus guidelines report from the ISMRM Open Science Initiative for Perfusion Imaging (OSIPI)

Author:

Dickie Ben R.12ORCID,Ahmed Zaki3ORCID,Arvidsson Jonathan45,Bell Laura C.6ORCID,Buckley David L.7ORCID,Debus Charlotte8,Fedorov Andrey9,Floca Ralf10,Gutmann Ingomar11,van der Heijden Rianne A.1213,van Houdt Petra J.14,Sourbron Steven15ORCID,Thrippleton Michael J.16ORCID,Quarles Chad17,Kompan Ina N.18,

Affiliation:

1. Division of Informatics, Imaging, and Data Sciences, School of Health Sciences, Faculty of Biology, Medicine and Health The University of Manchester Manchester UK

2. Geoffrey Jefferson Brain Research Center, Manchester Academic Health Science Center The University of Manchester Manchester UK

3. Corewell Health William Beaumont University Hospital Royal Oak Michigan USA

4. Department of Medical Radiation Sciences, Institute of Clinical Sciences Sahlgrenska Academy, University of Gothenburg Gothenburg Sweden

5. Department of Medical Physics and Biomedical Engineering Sahlgrenska University Hospital Gothenburg Sweden

6. Clinical Imaging Group, Genentech, Inc. South San Francisco California USA

7. Biomedical Imaging University of Leeds Leeds UK

8. Karlsruhe Institute of Technology Karlsruhe Germany

9. Brigham and Women's Hospital, Harvard Medical School Boston Massachusetts USA

10. National Center for Radiation Research in Oncology Heidelberg Institute for Radiation Oncology Heidelberg Germany

11. Faculty of Physics, Physics of Functional Materials University of Vienna Vienna Austria

12. Department of Radiology & Nuclear Medicine Erasmus MC University Medical Center Rotterdam The Netherlands

13. Department of Radiology University of Wisconsin‐Madison Madison Wisconsin USA

14. Department of Radiation Oncology The Netherlands Cancer Institute Amsterdam The Netherlands

15. Department of Infection, Immunity, and Cardiovascular Diseases University of Sheffield Sheffield UK

16. Edinburgh Imaging and Center for Clinical Brain Sciences University of Edinburgh Edinburgh UK

17. Department of Cancer Systems Imaging UT MD Anderson Cancer Center Houston Texas USA

18. Division of Medical Image Computing German Cancer Research Center Heidelberg Germany

Abstract

AbstractThis manuscript describes the ISMRM OSIPI (Open Science Initiative for Perfusion Imaging) lexicon for dynamic contrast‐enhanced and dynamic susceptibility‐contrast MRI. The lexicon was developed by Taskforce 4.2 of OSIPI to provide standardized definitions of commonly used quantities, models, and analysis processes with the aim of reducing reporting variability. The taskforce was established in February 2020 and consists of medical physicists, engineers, clinicians, data and computer scientists, and DICOM (Digital Imaging and Communications in Medicine) standard experts. Members of the taskforce collaborated via a slack channel and quarterly virtual meetings. Members participated by defining lexicon items and reporting formats that were reviewed by at least two other members of the taskforce. Version 1.0.0 of the lexicon was subject to open review from the wider perfusion imaging community between January and March 2022, and endorsed by the Perfusion Study Group of the ISMRM in the summer of 2022. The initial scope of the lexicon was set by the taskforce and defined such that it contained a basic set of quantities, processes, and models to enable users to report an end‐to‐end analysis pipeline including kinetic model fitting. We also provide guidance on how to easily incorporate lexicon items and definitions into free‐text descriptions (e.g., in manuscripts and other documentation) and introduce an XML‐based pipeline encoding format to encode analyses using lexicon definitions in standardized and extensible machine‐readable code. The lexicon is designed to be open‐source and extendable, enabling ongoing expansion of its content. We hope that widespread adoption of lexicon terminology and reporting formats described herein will increase reproducibility within the field.

Funder

Biotechnology and Biological Sciences Research Council

Engineering and Physical Sciences Research Council

Medical Research Council Canada

Publisher

Wiley

Subject

Radiology, Nuclear Medicine and imaging

Cited by 2 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3