A novel numerical model for protein sequences analysis based on spherical coordinates and multiple physicochemical properties of amino acids
Author:
Affiliation:
1. Shandong Key Laboratory of BiophysicsInstitute of Biophysics, Dezhou University Dezhou China
2. Department of Biomedical Engineering, College of Engineering, and Centre for Quantitative BiologyPeking University Beijing China
Funder
National Natural Science Foundation of China
Shandong Provincial Natural Science Foundation
Publisher
Wiley
Subject
Organic Chemistry,Biomaterials,Biochemistry,General Medicine,Biophysics
Link
https://onlinelibrary.wiley.com/doi/pdf/10.1002/bip.23282
Reference21 articles.
1. A generalization of CGR representation for analyzing and comparing protein sequences
2. Protein alignment: Exact versus approximate. An illustration
3. Local aromaticity and aromatic sextet theory beyond Clar
4. Accurate prediction of human essential genes using only nucleotide composition and association information
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1. Protein sequence comparison based on representation on a finite dimensional unit hypercube;Journal of Biomolecular Structure and Dynamics;2023-10-14
2. Multifarious aspects of the chaos game representation and its applications in biological sequence analysis;Computers in Biology and Medicine;2022-12
3. FFP: joint Fast Fourier transform and fractal dimension in amino acid property-aware phylogenetic analysis;BMC Bioinformatics;2022-08-19
4. FEGS: a novel feature extraction model for protein sequences and its applications;BMC Bioinformatics;2021-06-03
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