Insight into the role of the Bateman domain at the molecular and physiological levels through engineered IMP dehydrogenases

Author:

Gedeon Antoine1ORCID,Ayoub Nour1,Brûlé Sébastien2,Raynal Bertrand2,Karimova Gouzel3,Gelin Muriel4,Mechaly Ariel5,Haouz Ahmed5ORCID,Labesse Gilles4,Munier‐Lehmann Hélène1ORCID

Affiliation:

1. Institut Pasteur, Université Paris Cité, Unité de Chimie et Biocatalyse, CNRS UMR3523 Paris France

2. Institut Pasteur, Université Paris Cité, Plate‐Forme de Biophysique Moléculaire, C2RT, CNRS UMR3528 Paris France

3. Institut Pasteur, Université Paris Cité, Unité de Biochimie des Interactions Macromoléculaires, CNRS UMR3528 Paris France

4. Centre de Biologie Structurale Université Montpellier, INSERM, CNRS Montpellier France

5. Institut Pasteur, Université Paris Cité, Plate‐Forme de Cristallographie, C2RT, CNRS UMR3528 Paris France

Abstract

AbstractInosine 5′‐monophosphate (IMP) dehydrogenase (IMPDH) is an ubiquitous enzyme that catalyzes the NAD+‐dependent oxidation of inosine 5′‐monophosphate into xanthosine 5′‐monophosphate. This enzyme is formed of two distinct domains, a core domain where the catalytic reaction occurs, and a less‐conserved Bateman domain. Our previous studies gave rise to the classification of bacterial IMPDHs into two classes, according to their oligomeric and kinetic properties. MgATP is a common effector but cause to different effects when it binds within the Bateman domain: it is either an allosteric activator for Class I IMPDHs or a modulator of the oligomeric state for Class II IMPDHs. To get insight into the role of the Bateman domain in the dissimilar properties of the two classes, deleted variants of the Bateman domain and chimeras issued from the interchange of the Bateman domain between the three selected IMPDHs have been generated and characterized using an integrative structural biology approach. Biochemical, biophysical, structural, and physiological studies of these variants unveil the Bateman domain as being the carrier of the molecular behaviors of both classes.

Funder

Institut National de la Santé et de la Recherche Médicale

Institut Pasteur

French Infrastructure for Integrated Structural Biology

Publisher

Wiley

Subject

Molecular Biology,Biochemistry

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