T cell activation contributes to purifying selection against the MELAS‐associated m.3243A>G pathogenic variant in blood

Author:

Walker Melissa A.123ORCID,Li Shuqiang345,Livak Kenneth J.45,Karaa Amel6,Wu Catherine J.34,Mootha Vamsi K.237

Affiliation:

1. Department of Neurology Massachusetts General Hospital Boston Massachusetts USA

2. Howard Hughes Medical Institute and the Department of Molecular Biology Massachusetts General Hospital Boston Massachusetts USA

3. Broad Institute of MIT and Harvard Cambridge Massachusetts USA

4. Department of Medical Oncology Dana‐Farber Cancer Institute Boston Massachusetts USA

5. Translational Immunogenomics Laboratory Dana‐Farber Cancer Institute Boston Massachusetts USA

6. Department of Pediatrics, Genetics Unit Massachusetts General Hospital Boston Massachusetts USA

7. Department of Systems Biology Harvard Medical School Boston Massachusetts USA

Abstract

AbstractT cells have been shown to maintain a lower percentage (heteroplasmy) of the pathogenic m.3243A>G variant (MT‐TL1, associated with maternally inherited diabetes and deafness [MIDD] and mitochondrial encephalomyopathy with lactic acidosis and stroke‐like episodes [MELAS]). The mechanism(s) underlying this purifying selection, however, remain unknown. Here we report that purified patient memory CD4+ T cells have lower bulk m.3243A>G heteroplasmy compared to naïve CD4+ T cells. In vitro activation of naïve CD4+ m.3243A>G patient T cells results in lower bulk m.3243A>G heteroplasmy after proliferation. Finally, m.3243A>G patient T cell receptor repertoire sequencing reveals relative oligoclonality compared to controls. These data support a role for T cell activation in peripheral, purifying selection against high m.3243A>G heteroplasmy T cells at the level of the cell, in a likely cell‐autonomous fashion.

Funder

National Institutes of Health

National Institute of Neurological Disorders and Stroke

J. Willard and Alice S. Marriott Foundation

Howard Hughes Medical Institute

Publisher

Wiley

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