Machine‐Learning‐Assisted Rational Design of Si─Rhodamine as Cathepsin‐pH‐Activated Probe for Accurate Fluorescence Navigation

Author:

Xiang Fei‐Fan1,Zhang Hong12,Wu Yan‐Ling1,Chen Yu‐Jin1,Liu Yan‐Zhao1,Chen Shan‐Yong1,Guo Yan‐Zhi1,Yu Xiao‐Qi13,Li Kun1ORCID

Affiliation:

1. Key Laboratory of Green Chemistry and Technology of Ministry of Education College of Chemistry Sichuan University Chengdu 610064 P. R. China

2. Huaxi MR Research Center (HMRRC) Department of Radiology West China Hospital of Sichuan University Chengdu 610041 China

3. Asymmetric Synthesis and Chiral Technology Key Laboratory of Sichuan Province Department of Chemistry Xihua University Chengdu 610039 P. R. China

Abstract

AbstractHigh‐performance fluorescent probes stand as indispensable tools in fluorescence‐guided imaging, and are crucial for precise delineation of focal tissue while minimizing unnecessary removal of healthy tissue. Herein, machine‐learning‐assisted strategy to investigate the current available xanthene dyes is first proposed, and a quantitative prediction model to guide the rational synthesis of novel fluorescent molecules with the desired pH responsivity is constructed. Two novel Si─rhodamine derivatives are successfully achieved and the cathepsin/pH sequentially activated probe Si─rhodamine─cathepsin‐pH (SiR─CTS‐pH) is constructed. The results reveal that SiR─CTS‐pH exhibits higher signal‐to‐noise ratio of fluorescence imaging, compared to single pH or cathepsin‐activated probe. Moreover, SiR─CTS‐pH shows strong differentiation abilities for tumor cells and tissues and accurately discriminates the complex hepatocellular carcinoma tissues from normal ones, indicating its significant application potential in clinical practice. Therefore, the continuous development of xanthene dyes and the rational design of superior fluorescent molecules through machine‐learning‐assisted model broaden the path and provide more advanced methods to researchers.

Funder

National Natural Science Foundation of China

Science and Technology Plan Projects of Tibet Autonomous Region

Publisher

Wiley

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