PhredEM: a phred-score-informed genotype-calling approach for next-generation sequencing studies
Author:
Affiliation:
1. Department of Biostatistics and Bioinformatics; Emory University; Atlanta Georgia United States of America
2. Centers for Disease Control and Prevention; Atlanta Georgia United States of America
Funder
National Institute of General Medical Sciences
National Institutes of Health
Publisher
Wiley
Subject
Genetics (clinical),Epidemiology
Reference31 articles.
1. Quality scores and SNP detection in sequencing-by-synthesis systems;Brockman;Genome Research,2008
2. Simultaneous genotype calling and haplotype phasing improves genotype accuracy and reduces false-positive associations for genome-wide association studies;Browning;The American Journal of Human Genetics,2009
3. Convex Optimization
4. Maximum likelihood from incomplete data via the EM algorithm (with discussion);Dempster;Journal of the Royal Statistical Society Series B (Methodological),1977
5. A framework for variation discovery and genotyping using next-generation DNA sequencing data;DePristo;Nature Genetics,2011
Cited by 20 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献
1. GRHL2-controlled gene expression networks in luminal breast cancer;Cell Communication and Signaling;2023-01-23
2. Non-responsiveness to cardioprotection by ischaemic preconditioning in Ossabaw minipigs with genetic predisposition to, but without the phenotype of the metabolic syndrome;Basic Research in Cardiology;2022-11-11
3. Genomic divergence, local adaptation, and complex demographic history may inform management of a popular sportfish species complex;Ecology and Evolution;2022-10
4. Oral microbiome research – A Beginner's glossary;Journal of Oral and Maxillofacial Pathology;2022
5. Metagenomic analysis of primary colorectal carcinomas and their metastases identifies potential microbial risk factors;Molecular Oncology;2021-08-30
1.学者识别学者识别
2.学术分析学术分析
3.人才评估人才评估
"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370
www.globalauthorid.com
TOP
Copyright © 2019-2024 北京同舟云网络信息技术有限公司 京公网安备11010802033243号 京ICP备18003416号-3