Genome‐based survey of the SARS‐CoV‐2 BF.7 variant from Asia

Author:

Scarpa Fabio1ORCID,Giovanetti Marta23ORCID,Azzena Ilenia14,Locci Chiara14,Casu Marco4,Fiori Pier Luigi15ORCID,Ciccozzi Alessandra6,Imperia Elena67,Bazzani Liliana3,Borsetti Alessandra8ORCID,Maruotti Antonello9ORCID,Pascarella Stefano10ORCID,Sanna Daria1,Ciccozzi Massimo6ORCID

Affiliation:

1. Department of Biomedical Sciences University of Sassari Sassari Italy

2. Instituto Rene Rachou Fundação Oswaldo Cruz Belo Horizonte Minas Gerais Brazil

3. Sciences and Technologies for Sustainable Development and One Health University of Campus Bio‐Medico Rome Italy

4. Department of Veterinary Medicine University of Sassari Sassari Italy

5. Azienza Ospedaliera Universitaria (AOU) Sassari Sassari Italy

6. Unit of Medical Statistics and Molecular Epidemiology University Campus Bio‐Medico of Rome Rome Italy

7. Unit of Gastroenterology, Department of Medicine University Campus Bio‐Medico of Rome Rome Italy

8. National HIV/AIDS Research Center (CNAIDS); Istituto Superiore di Sanità (ISS) Rome Italy

9. Department GEPLI Libera Università Ss Maria Assunta Rome Italy

10. Department of Biochemical Sciences “A. Rossi Fanelli” Sapienza Università di Roma Rome Italy

Abstract

AbstractThe SARS‐CoV‐2 BF.7 variant represents one of the most recent subvariant under monitoring. At the beginning of the 2023 it caused several concerns especially in Asia because of a resurge in COVID‐19 cases. Here we perform a genome‐based integrative approach on SARS‐CoV‐2 BF.7 to shed light on this emerging lineage and produce some consideration on its real dangerousness. Both genetic and structural data suggest that this new variant currently does not show evidence of an high expansion capability. It is very common in Asia, but it appears less virulent than other Omicron variants as proved by its relatively low evolutionary rate (5.62 × 10−4 subs/sites/years). The last plateau has been reached around December 14, 2022 and then the genetic variability, and thus the viral population size, no longer increased. As already seen for several previous variants, the features that may be theoretically related to advantages are due to genetic drift that allows to the virus a constant adaptability to the host, but is not strictly connected to a fitness advantage. These results have further pointed that the genome‐based monitoring must continue uninterruptedly to be prepared and well documented on the real situation.

Publisher

Wiley

Subject

Infectious Diseases,Virology

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