Large‐scale across species transcriptomic analysis identifies genetic selection signatures associated with longevity in mammals

Author:

Liu Weiqiang12ORCID,Zhu Pingfen1ORCID,Li Meng1,Li Zihao12,Yu Yang3,Liu Gaoming1ORCID,Du Juan12ORCID,Wang Xiao1,Yang Jing12,Tian Ran4,Seim Inge45,Kaya Alaattin6ORCID,Li Mingzhou7ORCID,Li Ming1ORCID,Gladyshev Vadim N8ORCID,Zhou Xuming1ORCID

Affiliation:

1. Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology Chinese Academy of Sciences Beijing China

2. University of Chinese Academy of Sciences Beijing China

3. School of Life Sciences University of Science and Technology of China Anhui China

4. Integrative Biology Laboratory, College of Life Sciences Nanjing Normal University Nanjing China

5. School of Biology and Environmental Science Queensland University of Technology Brisbane QLD Australia

6. Department of Biology Virginia Commonwealth University Richmond VA USA

7. Institute of Animal Genetics and Breeding, College of Animal Science and Technology, Sichuan Agricultural University Chengdu China

8. Division of Genetics, Department of Medicine, Brigham and Women's Hospital Harvard Medical School Boston MA USA

Abstract

AbstractLifespan varies significantly among mammals, with more than 100‐fold difference between the shortest and longest living species. This natural difference may uncover the evolutionary forces and molecular features that define longevity. To understand the relationship between gene expression variation and longevity, we conducted a comparative transcriptomics analysis of liver, kidney, and brain tissues of 103 mammalian species. We found that few genes exhibit common expression patterns with longevity in the three organs analyzed. However, pathways related to translation fidelity, such as nonsense‐mediated decay and eukaryotic translation elongation, correlated with longevity across mammals. Analyses of selection pressure found that selection intensity related to the direction of longevity‐correlated genes is inconsistent across organs. Furthermore, expression of methionine restriction‐related genes correlated with longevity and was under strong selection in long‐lived mammals, suggesting that a common strategy is utilized by natural selection and artificial intervention to control lifespan. Our results indicate that lifespan regulation via gene expression is driven through polygenic and indirect natural selection.

Funder

National Natural Science Foundation of China

Publisher

Springer Science and Business Media LLC

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,Molecular Biology,General Neuroscience

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