Combining spectral clustering and large cut algorithms to find compensatory functional modules from yeast physical and genetic interaction data with GLASS-Reference-Cited by-同舟云学术

Combining spectral clustering and large cut algorithms to find compensatory functional modules from yeast physical and genetic interaction data with GLASS

Published:2022-08-07 Issue: Volume: Page:
ISSN:
Container-title:Proceedings of the 13th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics
language:
Short-container-title:

Author:

Kolawole Blessing¹,Cowen Lenore J.¹

Affiliation:

1. Tufts University

Funder

NSF

Publisher

ACM

Link

https://dl.acm.org/doi/pdf/10.1145/3535508.3545509

Reference31 articles.

1. Fault Tolerance in Protein Interaction Networks: Stable Bipartite Subgraphs and Redundant Pathways

2. Going the Distance for Protein Function Prediction: A New Distance Metric for Protein Interaction Networks

3. S. R. Collins etal 2007. Functional dissection of protein complexes involved in yeast chromosome biology using a genetic interaction map. Nature 446 7137 (2007) 806--810. S. R. Collins et al. 2007. Functional dissection of protein complexes involved in yeast chromosome biology using a genetic interaction map. Nature 446 7137 (2007) 806--810.

4. M. Costanzo B. VanderSluis etal 2016. A global genetic interaction network maps a wiring diagram of cellular function. Science 353 6306 (2016) aaf1420. M. Costanzo B. VanderSluis et al. 2016. A global genetic interaction network maps a wiring diagram of cellular function. Science 353 6306 (2016) aaf1420.

5. J. A. Efe F. Plattner etal 2005. Yeast Mon2p is a highly conserved protein that functions in the cytoplasm-to-vacuole transport pathway and is required for Golgi homeostasis. Protein science 118 20 (2005) 4751--4764. J. A. Efe F. Plattner et al. 2005. Yeast Mon2p is a highly conserved protein that functions in the cytoplasm-to-vacuole transport pathway and is required for Golgi homeostasis. Protein science 118 20 (2005) 4751--4764.