Scalable Genomic Assembly through Parallel de Bruijn Graph Construction for Multiple K-mers
Author:
Affiliation:
1. Purdue University, West Lafayette, IN, USA
2. Purdue Unviersity, West Lafayatte, IN, USA
Funder
National Science Foundation
Publisher
ACM
Link
https://dl.acm.org/doi/pdf/10.1145/3107411.3107482
Reference17 articles.
1. SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
2. Ray: Simultaneous Assembly of Reads from a Mix of High-Throughput Sequencing Technologies
3. Phillip EC Compeau Pavel A Pevzner and Glenn Tesler. 2011. How to apply de Bruijn graphs to genome assembly. Nature biotechnology Vol. 29 11 (2011) 987--991. Phillip EC Compeau Pavel A Pevzner and Glenn Tesler. 2011. How to apply de Bruijn graphs to genome assembly. Nature biotechnology Vol. 29 11 (2011) 987--991.
4. HipMer
5. High-quality draft assemblies of mammalian genomes from massively parallel sequence data
Cited by 5 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献
1. Distributed RMI-DBG model: Scalable iterative de Bruijn graph algorithm for short read genome assembly problem;Expert Systems with Applications;2023-12
2. Athena: Automated Tuning of k-mer based Genomic Error Correction Algorithms using Language Models;Scientific Reports;2019-11-06
3. Scalable Genome Assembly through Parallel de Bruijn Graph Construction for Multiple k-mers;Scientific Reports;2019-10-16
4. MULKSG: MULtiple K Simultaneous Graph Assembly;Algorithms for Computational Biology;2019
5. A Distributed Classifier for MicroRNA Target Prediction with Validation Through TCGA Expression Data;IEEE/ACM Transactions on Computational Biology and Bioinformatics;2018-07-01
1.学者识别学者识别
2.学术分析学术分析
3.人才评估人才评估
"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370
www.globalauthorid.com
TOP
Copyright © 2019-2024 北京同舟云网络信息技术有限公司 京公网安备11010802033243号 京ICP备18003416号-3