SyncSignature

Author:

Karpov Nikolai1,Zhang Qin1

Affiliation:

1. Indiana University Bloomington

Abstract

This paper introduces SyncSignature, the first fully parallelizable algorithmic framework for tree similarity joins under edit distance. SyncSignature makes use of implicit-synchronized signature generation schemes, which allow for an efficient and parallelizable candidate-generation procedure via hash join. Our experiments on large real-world datasets show that the proposed algorithms under the SyncSignature framework significantly outperform the state-of-the-art algorithm in the parallel computation environment. For datasets with big trees, they also exceed the state-of-the-art algorithms by a notable margin in the centralized/single-thread computation environment. To complement and guide the experimental study, we also provide a thorough theoretical analysis for all proposed signature generation schemes.

Publisher

Association for Computing Machinery (ACM)

Subject

General Earth and Planetary Sciences,Water Science and Technology,Geography, Planning and Development

Reference40 articles.

1. A relation between edit distance for ordered trees and edit distance for Euler strings

2. Tatsuya Akutsu , Daiji Fukagawa , and Atsuhiro Takasu . 2006. Approximating Tree Edit Distance Through String Edit Distance . In ISAAC (Lecture Notes in Computer Science) , Vol. 4288 . Springer , 90--99. Tatsuya Akutsu, Daiji Fukagawa, and Atsuhiro Takasu. 2006. Approximating Tree Edit Distance Through String Edit Distance. In ISAAC (Lecture Notes in Computer Science), Vol. 4288. Springer, 90--99.

3. Arvind Arasu Venkatesh Ganti and Raghav Kaushik. 2006. Efficient Exact Set-Similarity Joins. In PVLDB. 918--929. Arvind Arasu Venkatesh Ganti and Raghav Kaushik. 2006. Efficient Exact Set-Similarity Joins. In PVLDB. 918--929.

4. The pq -gram distance between ordered labeled trees

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