Glycosylation increases active site rigidity leading to improved enzyme stability and turnover

Author:

Ramakrishnan Krithika1,Johnson Rachel L.1,Winter Samuel D.2,Worthy Harley L.13ORCID,Thomas Christopher4,Humer Diana C.5,Spadiut Oliver5,Hindson Sarah H.2,Wells Stephen6,Barratt Andrew H.1,Menzies Georgina E.1,Pudney Christopher R.27ORCID,Jones D. Dafydd1ORCID

Affiliation:

1. Molecular Biosciences Division, School of Biosciences Cardiff University UK

2. Department of Biology and Biochemistry University of Bath UK

3. Biosciences, Faculty of Health and Life Sciences University of Exeter UK

4. Ortho Clinical Diagnostics Pencoed UK

5. Institute of Chemical, Environmental and Bioscience Engineering, Research Area Biochemical Engineering TU Wien Austria

6. Department of Physics University of Bath UK

7. Centre for Therapeutic Innovation University of Bath UK

Abstract

Glycosylation is the most prevalent protein post‐translational modification, with a quarter of glycosylated proteins having enzymatic properties. Yet, the full impact of glycosylation on the protein structure–function relationship, especially in enzymes, is still limited. Here, we show that glycosylation rigidifies the important commercial enzyme horseradish peroxidase (HRP), which in turn increases its turnover and stability. Circular dichroism spectroscopy revealed that glycosylation increased holo‐HRP's thermal stability and promoted significant helical structure in the absence of haem (apo‐HRP). Glycosylation also resulted in a 10‐fold increase in enzymatic turnover towards o‐phenylenediamine dihydrochloride when compared to its nonglycosylated form. Utilising a naturally occurring site‐specific probe of active site flexibility (Trp117) in combination with red‐edge excitation shift fluorescence spectroscopy, we found that glycosylation significantly rigidified the enzyme. In silico simulations confirmed that glycosylation largely decreased protein backbone flexibility, especially in regions close to the active site and the substrate access channel. Thus, our data show that glycosylation does not just have a passive effect on HRP stability but can exert long‐range effects that mediate the ‘native’ enzyme's activity and stability through changes in inherent dynamics.

Funder

Biotechnology and Biological Sciences Research Council

European Regional Development Fund

Publisher

Wiley

Subject

Cell Biology,Molecular Biology,Biochemistry

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