An exploration of assembly strategies and quality metrics on the accuracy of the rewarewa ( Knightia excelsa ) genome

Author:

McCartney Ann M.12ORCID,Hilario Elena23,Choi Seung‐Sub124,Guhlin Joseph25,Prebble Jessica M.26,Houliston Gary26,Buckley Thomas R.124ORCID,Chagné David27ORCID

Affiliation:

1. Manaaki Whenua ‐ Landcare Research Auckland New Zealand

2. Genomics Aotearoa Dunedin New Zealand

3. The New Zealand Institute for Plant and Food Research (Plant & Food Research) Sandringham New Zealand

4. School of Biological Sciences The University of Auckland Auckland New Zealand

5. University of Otago Dunedin New Zealand

6. Manaaki Whenua Landcare Research Lincoln New Zealand

7. Plant & Food Research Fitzherbert, Palmerston North New Zealand

Funder

Ministry for Business Innovation and Employment

Publisher

Wiley

Subject

Genetics,Ecology, Evolution, Behavior and Systematics,Biotechnology

Reference51 articles.

1. chloroExtractor: extraction and assembly of the chloroplast genome from whole genome shotgun data;Ankenbrand M.;Journal of Open Source Software,2018

2. The emerging clinical relevance of genomics in cancer medicine

3. Chromosome‐scale scaffolding of de novo genome assemblies based on chromatin interactions;Burton J. N.;Nature Biotechnology,2013

4. centroFlye: Assembling centromeres with long error‐prone reads;Bzikadze A. V.;bioRxiv,2019

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