A Comparison of Different Ciliate Metabarcode Genes as Bioindicators for Environmental Impact Assessments of Salmon Aquaculture-Reference-Cited by-同舟云学术

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A Comparison of Different Ciliate Metabarcode Genes as Bioindicators for Environmental Impact Assessments of Salmon Aquaculture

Published:2018-08-12 Issue:2 Volume:66 Page:294-308
ISSN:1066-5234
Container-title:Journal of Eukaryotic Microbiology
language:en
Short-container-title:J. Eukaryot. Microbiol.

Author:

Forster Dominik¹,Filker Sabine²,Kochems Rebecca¹,Breiner Hans-Werner¹,Cordier Tristan³,Pawlowski Jan³⁴,Stoeck Thorsten¹^ORCID

Affiliation:

1. Ecology Group; University of Technology Kaiserslautern; D-67663 Kaiserslautern Germany

2. Molecular Ecology; University of Technology Kaiserslautern; D-67663 Kaiserslautern Germany

3. Department of Genetics and Evolution; University of Geneva; 1211 Geneva Switzerland

4. ID-Gene ecodiagnostics Ltd.; Campus Biotech Innovation Park 1202 Geneva Switzerland

Funder

Deutsche Forschungsgemeinschaft

Swiss Network for International Studies

Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung

Publisher

Wiley

Subject

Microbiology

Link

http://onlinelibrary.wiley.com/wol1/doi/10.1111/jeu.12670/fullpdf

Reference114 articles.

1. Eukaryotic organisms in extreme acidic environments, the Rio Tinto case;Aguilera;Life,2013

2. Gapped blast and psi-blast: a new generation of protein database search programs;Altschul;Nucleic Acids Res.,1997

3. Taxonomy-free molecular diatom index for high-throughput eDNA biomonitoring;Apothéloz-Perret-Gentil;Mol. Ecol. Resour.,2017

4. Environmental status assessment using DNA metabarcoding: towards a genetics based marine biotic index (gAMBI);Aylagas;PLoS ONE,2014

5. Biomonitoring 2.0: a new paradigm in ecosystem assessment made possible by next-generation DNA sequencing;Baird;Mol. Ecol.,2012

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