De novo assembly and annotation of the North American bison ( Bison bison ) reference genome and subsequent variant identification-Reference-Cited by-同舟云学术

De novo assembly and annotation of the North American bison ( Bison bison ) reference genome and subsequent variant identification

Published:2021-03-29 Issue:3 Volume:52 Page:263-274
ISSN:0268-9146
Container-title:Animal Genetics
language:en
Short-container-title:Anim Genet

Author:

Dobson L. K.¹^ORCID,Zimin A.²,Bayles D.³,Fritz‐Waters E.⁴,Alt D.³,Olsen S.³,Blanchong J.⁵,Reecy J.⁵,Smith T. P. L.⁶,Derr J. N.¹

Affiliation:

1. Department of Veterinary Pathobiology Texas A&M University College Station TX77845USA

2. Department of Biomedical Engineering Center for Computational Biology Johns Hopkins University Baltimore MD21205USA

3. Infectious Bacterial Diseases Research Unit National Animal Disease Center Agricultural Research Service United States Department of Agriculture Ames IA50010USA

4. Department of Animal Science Iowa State University Ames IA50011USA

5. Department of Natural Resource Ecology and Management Iowa State University Ames IA50011USA

6. U.S. Meat Animal Research Center USDA‐ARS Clay Center NE68933USA

Publisher

Wiley

Subject

Genetics,Animal Science and Zoology,General Medicine

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1111/age.13060

Reference42 articles.

1. D-GENIES: dot plot large genomes in an interactive, efficient and simple way

2. A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff

3. The variant call format and VCFtools

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