Origin and Diversity of Wood Decay Fungi Revealed by Genome-Based Analyses
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Published:2019-10-25
Issue:4
Volume:65
Page:173-188
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ISSN:0021-4795
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Container-title:Mokuzai Gakkaishi
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language:en
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Short-container-title:Mokuzai Gakkaishi
Author:
Hori Chiaki1, Yoshida Makoto2, Igarashi Kiyohiko34, Samejima Masahiro35
Affiliation:
1. Research Faculty of Engineering, Hokkaido University 2. Faculty of Agriculture, Tokyo University of Agriculture and Technology 3. Graduate School of Agricultural and Life Sciences, The University of Tokyo 4. VTT Technical Research Centre of Finland 5. Faculty of Engineering, Shinshu University
Publisher
Japan Wood Society
Subject
General Chemical Engineering
Reference75 articles.
1. 1) Martinez, D., Larrondo, L. F., Putnam, N., Gelpke, M. D. S., Huang, K., Chapman, J., Helfenbein, K. G., Ramaiya, P., Detter, J. C., Larimer, F., Coutinho, P. M., Henrissat, B., Berka, R., Cullen, D., Rokhsar, D.: Genome sequence of the lignocellulose degrading fungus Phanerochaete chrysosporium strain RP78. Nat. Biotechnol. 22 (6) , 695-700 (2004). 2. 3) Floudas, D., Binder, M., Riley, R., Barry, K., Blanchette, R. A., Henrissat, B., Martínez, A. T., Otillar, R., Spatafora, J. W., Yadav, J. S., Aerts, A., Benoit, I., Boyd, A., Carlson, A., Copeland, A., Coutinho, P. M., de Vries, R. P., Ferreira, P., Findley, K., Foster, B., Gaskell, J., Glotzer, D., Górecki, P., Heitman, J., Hesse, C., Hori, C., Igarashi, K., Jurgens, J. A., Kallen, N., Kersten, P., Kohler, A., Kües, U., Kumar, T. K. A., Kuo, A., LaButti, K., Larrondo, L. F., Lindquist, E., Ling, A., Lombard, V., Lucas, S., Lundell, T., Martin, R., McLaughlin, D. J., Morgenstern, I., Morin, E., Murat, C., Nagy, L. G., Nolan, M., Ohm, R. A., Patyshakuliyeva, A., Rokas, A., Ruiz-Dueñas, F. J., Sabat, G., Salamov, A., Samejima, M., Schmutz, J., Slot, J. C., St John, F., Stenlid, J., Sun, H., Sun, S., Syed, K., Tsang, A., Wiebenga, A., Young, D., Pisabarro, A., Eastwood, D. C., Martin, F., Cullen, D., Grigoriev, I. V., Hibbett, D. S.: The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes. Science 336 (6089) , 1715-1719 (2012). 3. 4) Grigoriev, I. V., Nikitin, R., Haridas, S., Kuo, A., Ohm, R., Otillar, R., Riley, R., Salamov, A., Zhao, X., Korzeniewski, F., Smirnova, T., Nordberg, H., Dubchak, I., Shabalov, I.: MycoCosm portal: gearing up for 1000 fungal genomes. Nucleic Acids Res. 42 (D1) , D699-704 (2014). 4. 5) Lutzoni, F., Nowak, M. D., Alfaro, M. E., Reeb, V., Mi dlikowska, J., Krug, M., Arnold, A. E., Lewis, L. A., Swofford, D. L., Hibbett, D., Hilu, K., James, T. Y., Quandt, D., Magallón, S.: Contemporaneous radiations of fungi and plants linked to symbiosis. Nat. Commun. 9 (5451) , 1-18 (2018). 5. 6) Hori, C., Gaskell, J., Cullen, D., Sabat, G., Stewart, P. E., Lail, K., Peng, Y., Barry, K., Grigoriev, I. V., Kohler, A., Fauchery, L., Martin, F., Zeiner, C. A., Bhatnagar, J. M.: Multi-omic analyses of extensively decayed Pinus contorta reveal expression of a diverse array of lignocellulose degrading enzymes. Appl. Environ. Microbiol. 84 (20) , e01133-18 (2018).
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