Development and application of a DNA metabarcoding method for comprehensive analysis of soil nematode communities

Author:

Kawanobe Masanori,Toyota Koki,Ritz Karl

Publisher

Elsevier BV

Subject

Soil Science,Agricultural and Biological Sciences (miscellaneous),Ecology

Reference70 articles.

1. Metabarcoding of soil nematodes: the importance of taxonomic coverage and availability of reference sequences in choosing suitable marker(s);Ahmed;Metabarcoding Metagenom.,2019

2. SILVA, RDP, Greengenes, NCBI and OTT—how do these taxonomies compare?;Balvočiūtė;BMC Genomics,2017

3. Near infrared reflectance spectroscopy (NIRS) could be used for characterization of soil nematode community;Barthès;Soil Biol. Biochem.,2011

4. Fitting linear mixed-effects models using lme4;Bates;J. Stat. Softw.,2015

5. Detection and quantification of root-knot nematode (Meloidogyne javanica), lesion nematode (Pratylenchus zeae) and dagger nematode (Xiphinema elongatum) parasites of sugarcane using real-time PCR;Berry;Mol. Cell. Probes,2008

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