Applications and limitations of bioinformatics pipelines and tools for metagenomic study

Author:

Dixit Sangita,Behera Dibyajyoti Uttameswar,Gaur Mahendra,Subudhi Enketeswara

Publisher

Elsevier

Reference49 articles.

1. Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries;Aird;Genome Biology,2011

2. Deblur rapidly resolves single-nucleotide community sequence patterns;Amir;mSystems,2017

3. Tax4Fun: predicting functional profiles from metagenomic 16S rRNA data;Aßhauer;Bioinformatics (Oxford, England),2015

4. GenBank;Benson;Nucleic Acids Research,2012

5. Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing;Bokulich;Nature Methods,2013

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