Twist versus nonlinear stacking in short DNA molecules

Author:

Zoli MarcoORCID

Publisher

Elsevier BV

Subject

Applied Mathematics,General Agricultural and Biological Sciences,General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,Modelling and Simulation,General Medicine,Statistics and Probability

Reference98 articles.

1. DNA A-tracts bending;Ababneh;J. Theor. Biol.,2008

2. Bubble dynamics in double-stranded DNA;Altan-Bonnet;Phys. Rev. Lett.,2003

3. Sequence sensitivity of breathing dynamics in heteropolymer DNA;Ambjörnsson;Phys. Rev. Lett.,2006

4. Anon-a. Instead, at 268nm, the percentage increase in absorbed light due to the opening of AT or GC bps changes very little. See Wartell and Benight (1985).

5. Anon-b. Some works extending the PB model, including the twist around the molecule backbone, are given in, e.g. Weber (2006); Barbi et al. (1999). These works however do not consider the anharmonic stacking: see Section 2.

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