Estimation of cell type proportions from bulk RNA-Seq of porcine whole blood samples using partial reference-free deconvolution-Reference-Cited by-同舟云学术

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Estimation of cell type proportions from bulk RNA-Seq of porcine whole blood samples using partial reference-free deconvolution

Published:2023-09 Issue: Volume:30 Page:200159
ISSN:2352-4065
Container-title:Animal Gene
language:en
Short-container-title:Animal Gene

Author:

Keel Brittney N.,Lindholm-Perry Amanda K.,Rohrer Gary A.,Oliver William T.

Publisher

Elsevier BV

Subject

Insect Science,Genetics,Animal Science and Zoology,Aquatic Science,Biotechnology

Reference49 articles.

1. glmGamPoi: fitting gamma-poison generalized linear models on single cell count data;Ahlmann-Eltze;Bioinformatics,2020

2. Characterization and transcriptomic analysis of porcine blood conventional and plasmacytoid dendritic cells reveals striking species-specific differences;Auray;J. Immunol.,2016

3. Exploring phenotype for disease resilience in pigs using complete blood count data from a natural disease challenge model;Bai;Front. Genet.,2020

4. Purification of specific cell population by fluorescence activated cell sorting (FACS);Basu;J. Vis. Exp.,2010

5. Influence of genetics and the pre-vaccination blood transcriptome on the variability of antibody levels after vaccination against Mycoplasma hyopneumoniae in pigs;Blanc;Genet. Sel. Evol.,2021

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1. Transcriptomics;Current Topics in Behavioral Neurosciences;2024

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