Bioinformatics strategies for taxonomy independent binning and visualization of sequences in shotgun metagenomics

Author:

Sedlar Karel,Kupkova Kristyna,Provaznik Ivo

Funder

Brno University of Technology

Publisher

Elsevier BV

Subject

Computer Science Applications,Genetics,Biochemistry,Structural Biology,Biophysics,Biotechnology

Reference82 articles.

1. Isolating “uncultivable” microorganisms in pure culture in a simulated natural environment;Kaeberlein;Science,2002

2. Metagenomics;Sleator;Lett Appl Microbiol,2008

3. The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification;Reddy;Nucleic Acids Res,2014

4. Cloning the soil metagenome: a strategy for accessing the genetic and functional diversity of uncultured microorganisms;Rondon;Appl Environ Microbiol,2000

5. Marine metagenomics: strategies for the discovery of novel enzymes with biotechnological applications from marine environments;Kennedy;Microb Cell Fact,2008

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