UPIMAPI, reCOGnizer and KEGGCharter: Bioinformatics tools for functional annotation and visualization of (meta)-omics datasets-Reference-Cited by-同舟云学术

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UPIMAPI, reCOGnizer and KEGGCharter: Bioinformatics tools for functional annotation and visualization of (meta)-omics datasets

Published:2022 Issue: Volume:20 Page:1798-1810
ISSN:2001-0370
Container-title:Computational and Structural Biotechnology Journal
language:en
Short-container-title:Computational and Structural Biotechnology Journal

Author:

Sequeira João C.,Rocha Miguel,Alves M. Madalena,Salvador Andreia F.

Publisher

Elsevier BV

Subject

Computer Science Applications,Genetics,Biochemistry,Structural Biology,Biophysics,Biotechnology

Reference25 articles.

1. Progress in quickly finding orthologs as reciprocal best hits: comparing blast, last, diamond and MMseqs2;Hernández-Salmerón;BMC Genomics,2020

2. UniProt: A hub for protein information;The UniProt Consortium;Nucleic Acids Res,2015

3. Reference sequence (RefSeq) database at NCBI: Current status, taxonomic expansion, and functional annotation;O’Leary;Nucleic Acids Res,2016

4. Microbial genome analysis: The COG approach;Galperin;Brief Bioinform,2019

5. Bioinformatic approaches for functional annotation and pathway inference in metagenomics data;De Filippo;Brief Bioinform,2012

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