COSMO: A dynamic programming algorithm for multicriteria codon optimization-Reference-Cited by-同舟云学术

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COSMO: A dynamic programming algorithm for multicriteria codon optimization

Published:2020 Issue: Volume:18 Page:1811-1818
ISSN:2001-0370
Container-title:Computational and Structural Biotechnology Journal
language:en
Short-container-title:Computational and Structural Biotechnology Journal

Author:

Taneda Akito,Asai Kiyoshi

Funder

Japan Agency for Medical Research and Development

Publisher

Elsevier BV

Subject

Computer Science Applications,Genetics,Biochemistry,Structural Biology,Biophysics,Biotechnology

Reference30 articles.

1. Codon bias as a means to fine-tune gene expression;Quax;Mol Cell,2015

2. Large scale comparative codon-pair context analysis unveils general rules that fine-tune evolution of mRNA primary structure;Moura;PLoS ONE,2007

3. Nonrandom utilization of codon pairs in Escherichia coli;Gutman;Proc Natl Acad Sci,1989

4. Differential bicodon usage in lowly and highly abundant proteins;Diambra;PeerJ,2017

5. Synonymous codons: choose wisely for expression;Brule;Trends Genet,2017

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1. A statistical-physics approach for codon usage optimisation;Computational and Structural Biotechnology Journal;2024-12

2. Strategies to overcome the challenges of low or no expression of heterologous proteins in Escherichia coli;Biotechnology Advances;2024-10

3. Codon-optimization in gene therapy: promises, prospects and challenges;Frontiers in Bioengineering and Biotechnology;2024-03-28

4. Optipyzer: A fast and flexible multi-species codon optimization server;2023-05-24

5. Unlocking the promise of mRNA therapeutics;Nature Biotechnology;2022-11

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