Dynamic partitioning of search patterns for approximate pattern matching using search schemes-Reference-Cited by-同舟云学术

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Dynamic partitioning of search patterns for approximate pattern matching using search schemes

Published:2021-07 Issue:7 Volume:24 Page:102687
ISSN:2589-0042
Container-title:iScience
language:en
Short-container-title:iScience

Author:

Renders Luca,Marchal Kathleen,Fostier Jan

Publisher

Elsevier BV

Subject

Multidisciplinary

Reference19 articles.

1. Replacing suffix trees with enhanced suffix arrays;Abouelhoda;J. Discrete Algorithms,2004

2. Basic local alignment search tool;Altschul;J. Mol. Biol.,1990

3. A block-sorting lossless data compression algorithm. Technical report;Burrows;Digit. Syst. Res. Cent.,1994

4. Opportunistic data structures with applications;Ferragina,2000

5. Optimized succinct data structures for massive data;Gog;Softw. Pract. Exp.,2014

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1. b-move: faster bidirectional character extensions in a run-length compressed index;2024-06-02

2. Automated Design of Efficient Search Schemes for Lossless Approximate Pattern Matching;Lecture Notes in Computer Science;2024

3. Radiant Thermal Test System for Turbine Blades Using a Novel Pattern Search Algorithm;Journal of Engineering for Gas Turbines and Power;2023-10-26

4. Pan-genome de Bruijn graph using the bidirectional FM-index;BMC Bioinformatics;2023-10-26

5. Approximate Pattern Matching Using Search Schemes and In-Text Verification;Bioinformatics and Biomedical Engineering;2022

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