Description of Lysinibacillus sinduriensis sp. nov., and transfer of Bacillus massiliensis and Bacillus odysseyi to the genus Lysinibacillus as Lysinibacillus massiliensis comb. nov. and Lysinibacillus odysseyi comb. nov. with emended description of the genus Lysinibacillus

Author:

Jung Min Young1,Kim Joong-Su2,Paek Woon Kee3,Styrak Igor45,Park In-Soon1,Sin Yeseul1,Paek Jayoung1,Park Keun Ae1,Kim Hongik6,Kim Hong Lim7,Chang Young-Hyo1

Affiliation:

1. Korean Collection for Type Cultures, Biological Resource Center, KRIBB, 125 Gwahak-ro, Yuseong-gu, Daejeon 305-806, Republic of Korea

2. Jeonbuk Branch Institute, Molecular Bioprocess Research Center, KRIBB, 181 Ipsin-gil, Jeongeup-si, Jeollabuk-do 580-185, Republic of Korea

3. National Science Museum, 32-2 Guseong-dong, Yuseong-gu, Daejeon 305-705, Republic of Korea

4. Department of Biotechnology, Institute of Geotechnics, Watsonova 45, 043 53 Kosice, Slovakia

5. Department of Microbiology, Institute of Animal Physiology, Soltesovej 4-6, 04001 Kosice, Slovakia

6. R&D Division, Vitabio Inc., Yongjeon-dong 21-3, Daejeon 300-824, Republic of Korea

7. Namhae Sub-Station, National Horticultural Research Institute, RDA, Namhae, 668-812, Republic of Korea

Abstract

A Gram-positive, rod-shaped, endospore-forming bacterium, designated strain BLB-1T, was isolated from samples of tidal flat sediment from the Yellow Sea. 16S rRNA gene sequence analysis demonstrated that the isolate belonged to the Bacillus rRNA group 2 and was closely related to Bacillus massiliensis CIP 108446T (97.4 %), Bacillus odysseyi ATCC PTA-4993T (96.7 %), Lysinibacillus fusiformis DSM 2898T (96.2 %) and Lysinibacillus boronitolerans DSM 17140T (95.9 %). Sequence similarities with related species in other genera, including Caryophanon , Sporosarcina and Solibacillus , were <96.1 %. Chemotaxonomic data supported the affiliation of strain BLB-1T with the genus Lysinibacillus . The major menaquinone was MK-7, the cell-wall sugars were glucose and xylose, the cell-wall peptidoglycan type was A4α (l-Lys–d-Asp), the major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine and several unknown phospholipids, and the major fatty acids were anteiso-C15 : 0 (35.6 %), iso-C15 : 0 (25.6 %) and anteiso-C17 : 0 (16.5 %). The most closely related species, Bacillus massiliensis and Bacillus odysseyi , were also assigned to this genus based on phylogenetic analysis and phenotypic data. The results of DNA–DNA hybridizations and phenotypic tests supported the differentiation of all three taxa from species of the genus Lysinibacillus with validly published names. Thus, strain BLB-1T ( = KCTC 13296T  = JCM 15800T) represents a novel species, for which the name Lysinibacillus sinduriensis sp. nov. is proposed. It is also proposed that Bacillus massiliensis CIP 108446T ( = 4400831T = CCUG49529T  = KCTC 13178T) and Bacillus odysseyi NBRC 100172T ( = 34hs-1T  = ATCC PTA-4993T  = NRRL B-30641T  = DSM 18869T  = CIP 108263T  = KCTC 3961T) be transferred to the genus Lysinibacillus as Lysinibacillus massiliensis comb. nov. and Lysinibacillus odysseyi comb. nov., respectively.

Funder

Ministry of Education, Science and Technology, Republic of Korea

KRIBB Research Initiative Program

Korea Science and Engineering Foundation

Publisher

Microbiology Society

Subject

General Medicine,Ecology, Evolution, Behavior and Systematics,Microbiology

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