Characterization of bla NDM-5-harbouring Klebsiella pneumoniae sequence type 11 international high-risk clones isolated from clinical samples in Yangon General Hospital, a tertiary-care hospital in Myanmar

Author:

Sugawara Yo1ORCID,Akeda Yukihiro21,Hagiya Hideharu2ORCID,Zin Khwar Nyo3,Aye Mya Mya4,Takeuchi Dan1,Matsumoto Yuki5,Motooka Daisuke5,Nishi Isao6,Tomono Kazunori2,Hamada Shigeyuki1

Affiliation:

1. Japan–Thailand Research Collaboration Center on Emerging and Re-emerging Infections, Research Institute for Microbial Diseases, Osaka University, Suita, Japan

2. Department of Infection Control and Prevention, Graduate School of Medicine, Osaka University, Suita, Japan

3. Clinical Laboratory Department, Yangon General Hospital, Yangon, Myanmar

4. Bacteriology Research Division, Department of Medical Research, Yangon, Myanmar

5. Department of Infection Metagenomics, Research Institute for Microbial Diseases, Osaka University, Suita, Japan

6. Laboratory for Clinical Investigation, Osaka University Hospital, Suita, Japan

Abstract

Fifteen Klebsiella pneumoniae isolates harbouring bla NDM genes were identified from blood and sputum specimens of patients at a tertiary-care facility (Yangon General Hospital, Yangon, Myanmar) in 2018. Two of the isolates belonged to sequence type (ST) 11, an international high-risk clone. Whole-genome sequencing and phylogenetic analyses revealed that these two isolates were clustered together with other ST11 isolates originating from other countries. The isolates harboured the bla NDM-5 gene on an IncFII-type plasmid that is prevalent among carbapenemase-producing Enterobacteriaceae in Yangon but has rarely been found in other ST11 isolates. Our data suggests the regional presence of the ST11 international high-risk clone and its acquisition of an endemic bla NDM-5-carrying plasmid.

Funder

Japan Agency for Medical Research and Development

Publisher

Microbiology Society

Subject

Microbiology (medical),General Medicine,Microbiology

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