Description of Salinimicrobium tongyeongense sp. nov., isolated from seawater

Author:

Ganbat Dariimaa1ORCID,Lee Dong-Woo2ORCID,Kim Seong-Bo3ORCID,Lee Yong-Jik4ORCID,Nam Gaewon4ORCID,Chi Won-Jae5ORCID,Lee Byoung-Hee6ORCID,Jung You-Jung7ORCID,Lee Jung-Sook8ORCID,Lee Sang-Jae1ORCID

Affiliation:

1. Major in Food Biotechnology and Research Center for Extremophiles and Marine Microbiology, Silla University, Busan 46958, Republic of Korea

2. Department of Biotechnology, Yonsei University, Seoul 03722, Republic of Korea

3. Bio-Living Engineering, Global Leaders College, Yonsei University, Seoul 03722, Republic of Korea

4. Department of Bio-Cosmetics, Seowon University, Chung-Ju 28674, Republic of Korea

5. Microorganism Resources Division, National Institute of Biological Resources, Incheon 22689, Republic of Korea

6. Biological Resources Research Department, National Institute of Biological Resources, Incheon 22689, Republic of Korea

7. Biological Resources Utilization Department, National Institute of Biological Resources, Incheon 22689, Republic of Korea

8. Korean Collection for Type Cultures, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Jeongeup 56212, Republic of Korea

Abstract

A Gram-stain-negative, non-motile by gliding and moderately halophilic rod-shaped bacterium HN-2-9-2T was isolated from seawater in Tongyeong, Republic of Korea. The strain grew at concentrations of 0.5‒7 % (w/v) NaCl, at pH 5.5‒8.5 and in a temperature range of 18‒45 °C. HN-2-9-2T shared the highest 16S rRNA gene sequence percentage with Salinimicrobium xinjiangense BH206T (98.2 %). The average nucleotide identity (ANI), average amino acid identity (AAI) and digital DNA–DNA hybridisation (dDDH) values between HN-2-9-2T and the S. xinjiangense BH206T were 76.0 %, 81.9 % and 19.7 %, respectively. The genome comprised 3 509 958 bp with a DNA G+C content of 43.0%. HN-2-9-2T contained MK-6 as the sole menaquinone. The predominant fatty acids were iso-C15 : 0, anteiso-C15 : 0, iso-C17 : 0 3-OH, iso-C16 : 0, iso-C15 : 1G and summed feature 9, comprising iso-C17 : 1ω6c/C16 : 1 10-methyl. The polar lipids contained phosphatidylethanolamine, one unidentified phospholipid, two unidentified aminolipids, an unidentified glycolipid and six unidentified lipids. The polyphasic taxonomic properties indicate that the strain represents a novel species within the genus Salinimicrobium , for which the name Salinimicrobium tongyeongense sp. nov. is proposed. The type strain is HN-2-9-2T (=KCTC 82934T=NBRC 115920T).

Funder

Ministry of Oceans and Fisheries

National Research Foundation

National Institute of Biological Resources

Ministry of Trade, Industry and Energy

Publisher

Microbiology Society

Subject

General Medicine,Ecology, Evolution, Behavior and Systematics,Microbiology

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