Hymenobacter artigasi sp. nov., isolated from air sampling in maritime Antarctica

Author:

Roldán Diego M.1,Kyrpides Nikos2ORCID,Woyke Tanja2ORCID,Shapiro Nicole2ORCID,Whitman William B.3ORCID,Králová Stanislava4ORCID,Sedláček Ivo4ORCID,Busse Hans-Jürgen5,Menes Rodolfo Javier1ORCID

Affiliation:

1. Laboratorio de Ecología Microbiana Medioambiental, Microbiología, Facultad de Química y Unidad Asociada del Instituto de Química Biológica, Facultad de Ciencias, Universidad de la República, Uruguay

2. DOE Joint Genomics Institute, Walnut Creek, CA 94598, USA

3. Microbiology Department, University of Georgia, Athens, GA 30602, USA

4. Czech Collection of Microorganisms, Department of Experimental Biology, Masaryk University, Brno, Czechia

5. Institut für Mikrobiologie, Veterinärmedizinische Universität Wien, Veterinärplatz 1, A-1210 Wien, Austria

Abstract

A rod-shaped and Gram-stain-negative bacterial strain, 1BT, was isolated from an air sample collected at King George Island, maritime Antarctica. Strain 1BT is strictly aerobic, psychrophilic, catalase-positive, oxidase-positive and non-motile. Growth of strain 1BT is observed at 0–20 °C (optimum, 10 °C), pH 6.0–8.0 (optimum, pH 8.0) and in the presence of 0–1.0% NaCl (optimum, 0.5 % NaCl). Phylogenetic analysis based on 16S rRNA gene sequences places strain 1BT within the genus Hymenobacter and shows the highest similarity to Hymenobacter antarcticus VUG-A42aaT (97.5 %). The predominant menaquinone of strain 1BT is MK-7 and the major fatty acids (>10 %) comprise summed feature 3 (C16 : 1  ω7c and/or C16 : 1  ω6c; 32.5 %), iso-C15 : 0 (17.6 %) and anteiso C15 : 0 (12.3 %). The polar lipid profile consists of the major compounds phosphatidylethanolamine, phosphatidylserine, two unidentified aminolipids and one unidentified phospholipid. The DNA G+C content based on the draft genome sequence is 61.2 mol%. Based on the data from the current polyphasic study, 1BT represents a novel species of the genus Hymenobacter , for which the name Hymenobacter artigasi sp. nov. is suggested. The type strain is 1BT (=CCM 8970T=CGMCC 1.16843T).

Publisher

Microbiology Society

Subject

General Medicine,Ecology, Evolution, Behavior and Systematics,Microbiology

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