Ancient chicken remains reveal the origins of virulence in Marek’s disease virus

Author:

Fiddaman Steven R.1ORCID,Dimopoulos Evangelos A.23ORCID,Lebrasseur Ophélie45ORCID,du Plessis Louis67ORCID,Vrancken Bram89ORCID,Charlton Sophy210ORCID,Haruda Ashleigh F.2ORCID,Tabbada Kristina2,Flammer Patrik G.1,Dascalu Stefan1ORCID,Marković Nemanja11ORCID,Li Hannah12ORCID,Franklin Gabrielle13ORCID,Symmons Robert14,Baron Henriette15ORCID,Daróczi-Szabó László16ORCID,Shaymuratova Dilyara N.17ORCID,Askeyev Igor V.17ORCID,Putelat Olivier18ORCID,Sana Maria19ORCID,Davoudi Hossein20ORCID,Fathi Homa20ORCID,Mucheshi Amir Saed21ORCID,Vahdati Ali Akbar22ORCID,Zhang Liangren23ORCID,Foster Alison24,Sykes Naomi25ORCID,Baumberg Gabrielle Cass2ORCID,Bulatović Jelena26ORCID,Askeyev Arthur O.17ORCID,Askeyev Oleg V.17ORCID,Mashkour Marjan2027,Pybus Oliver G.128ORCID,Nair Venugopal129ORCID,Larson Greger2ORCID,Smith Adrian L.1ORCID,Frantz Laurent A. F.3031ORCID

Affiliation:

1. Department of Biology, University of Oxford, Oxford, UK.

2. The Palaeogenomics and Bio-Archaeology Research Network, Research Laboratory for Archaeology and History of Art, University of Oxford, Oxford, UK.

3. Department of Veterinary Medicine, University of Cambridge, Cambridge, UK.

4. Centre d’Anthropobiologie et de Génomique de Toulouse, CNRS/Université Toulouse III Paul Sabatier, Toulouse, France.

5. Instituto Nacional de Antropología y Pensamiento Latinoamericano, Ciudad Autónoma de Buenos Aires, Buenos Aires, Argentina.

6. Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.

7. Swiss Institute of Bioinformatics, Lausanne, Switzerland.

8. Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, Leuven, Belgium.

9. Spatial Epidemiology Lab (SpELL), Université Libre de Bruxelles, Brussels, Belgium.

10. BioArCh, Department of Archaeology, University of York, York, UK.

11. Institute of Archaeology, Belgrade, Serbia.

12. Institute of Immunity and Transplantation, University College London, London, UK.

13. Silkie Club of Great Britain, Charing, UK.

14. Fishbourne Roman Palace, Fishbourne, UK.

15. Leibniz-Zentrum für Archäologie, Mainz, Germany.

16. Medieval Department, Budapest History Museum, Budapest, Hungary.

17. Laboratory of Biomonitoring, The Institute of Problems in Ecology and Mineral Wealth, Tatarstan Academy of Sciences, Kazan, Russia.

18. Archéologie Alsace–PAIR, Sélestat, Bas-Rhin, France.

19. Departament de Prehistòria, Universitat Autònoma de Barcelona, Barcelona, Spain.

20. Bioarchaeology Laboratory, Central Laboratory, University of Tehran, Tehran, Iran.

21. Department of Art and Architecture, Payame Noor University (PNU), Tehran, Iran.

22. Iranian Ministry of Cultural Heritage, Tourism, and Handicrafts, North Khorasan Office, Iran.

23. Department of Archaeology, School of History, Nanjing University, China.

24. Headland Archaeology, Edinburgh, UK.

25. Department of Archaeology, University of Exeter, Exeter, UK.

26. Department of Historical Studies, University of Gothenburg, Gothenburg, Sweden.

27. CNRS, National Museum Natural History Paris, Paris, France.

28. Department of Pathobiology and Population Sciences, Royal Veterinary College, London, UK.

29. Viral Oncogenesis Group, Pirbright Institute, Woking, UK.

30. Palaeogenomics Group, Institute of Palaeoanatomy, Domestication Research and the History of Veterinary Medicine, Ludwig-Maximilians-Universitat, Munich, Germany.

31. School of Biological and Chemical Sciences, Queen Mary University of London, London, UK.

Abstract

The pronounced growth in livestock populations since the 1950s has altered the epidemiological and evolutionary trajectory of their associated pathogens. For example, Marek’s disease virus (MDV), which causes lymphoid tumors in chickens, has experienced a marked increase in virulence over the past century. Today, MDV infections kill >90% of unvaccinated birds, and controlling it costs more than US$1 billion annually. By sequencing MDV genomes derived from archeological chickens, we demonstrate that it has been circulating for at least 1000 years. We functionally tested the Meq oncogene, one of 49 viral genes positively selected in modern strains, demonstrating that ancient MDV was likely incapable of driving tumor formation. Our results demonstrate the power of ancient DNA approaches to trace the molecular basis of virulence in economically relevant pathogens.

Publisher

American Association for the Advancement of Science (AAAS)

Subject

Multidisciplinary

Reference73 articles.

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