Sequencing of 50 Human Exomes Reveals Adaptation to High Altitude

Author:

Yi Xin12,Liang Yu12,Huerta-Sanchez Emilia3,Jin Xin14,Cuo Zha Xi Ping25,Pool John E.36,Xu Xun1,Jiang Hui1,Vinckenbosch Nicolas3,Korneliussen Thorfinn Sand7,Zheng Hancheng14,Liu Tao1,He Weiming18,Li Kui25,Luo Ruibang14,Nie Xifang1,Wu Honglong19,Zhao Meiru1,Cao Hongzhi19,Zou Jing1,Shan Ying14,Li Shuzheng1,Yang Qi1,Asan 12,Ni Peixiang1,Tian Geng12,Xu Junming1,Liu Xiao1,Jiang Tao19,Wu Renhua1,Zhou Guangyu1,Tang Meifang1,Qin Junjie1,Wang Tong1,Feng Shuijian1,Li Guohong1,Huasang 1,Luosang Jiangbai1,Wang Wei1,Chen Fang1,Wang Yading1,Zheng Xiaoguang12,Li Zhuo1,Bianba Zhuoma10,Yang Ge10,Wang Xinping11,Tang Shuhui11,Gao Guoyi12,Chen Yong5,Luo Zhen5,Gusang Lamu5,Cao Zheng1,Zhang Qinghui1,Ouyang Weihan1,Ren Xiaoli1,Liang Huiqing1,Zheng Huisong1,Huang Yebo1,Li Jingxiang1,Bolund Lars1,Kristiansen Karsten17,Li Yingrui1,Zhang Yong1,Zhang Xiuqing1,Li Ruiqiang17,Li Songgang1,Yang Huanming1,Nielsen Rasmus137,Wang Jun17,Wang Jian1

Affiliation:

1. BGI-Shenzhen, Shenzhen 518083, China.

2. The Graduate University of Chinese Academy of Sciences, Beijing 100062, China.

3. Department of Integrative Biology and Department of Statistics, University of California Berkeley, Berkeley, CA 94820, USA.

4. Innovative Program for Undergraduate Students, School of Bioscience and Biotechnology, South China University of Technology, Guangzhou 510641, China.

5. The People’s Hospital of the Tibet Autonomous Region, Lhasa 850000, China.

6. Department of Evolution and Ecology, University of California Davis, Davis, CA 95616, USA.

7. Department of Biology, University of Copenhagen, DK-1165 Copenhagen, Denmark.

8. Innovative Program for Undergraduate Students, School of Science, South China University of Technology, Guangzhou 510641, China.

9. Genome Research Institute, Shenzhen University Medical School, Shenzhen 518060, China.

10. The People’s Hospital of Lhasa, Lhasa, 850000, China.

11. The Military General Hospital of Tibet, Lhasa, 850007, China.

12. The hospital of XiShuangBanNa Dai Nationalities, Autonomous Jinghong 666100, Yunnan, China.

Abstract

No Genetic Vertigo Peoples living in high altitudes have adapted to their situation (see the Perspective by Storz ). To identify gene regions that might have contributed to high-altitude adaptation in Tibetans, Simonson et al. (p. 72 , published online 13 May) conducted a genome scan of nucleotide polymorphism comparing Tibetans, Han Chinese, and Japanese, while Yi et al. (p. 75 ) performed comparable analyses on the coding regions of all genes—their exomes. Both studies converged on a gene, endothelial Per-Arnt-Sim domain protein 1 (also known as hypoxia-inducible factor 2 α), which has been linked to the regulation of red blood cell production. Other genes identified that were potentially under selection included adult and fetal hemoglobin and two functional candidate loci that were correlated with low hemoglobin concentration in Tibetans. Future detailed functional studies will now be required to examine the mechanistic underpinnings of physiological adaptation to high altitudes.

Publisher

American Association for the Advancement of Science (AAAS)

Subject

Multidisciplinary

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