AVR/I/SSAPDB: A Comprehensive & Specialised Knowledgebase of Antimicrobial Peptides to Combat VRSA, VISA, and VSSA

Author:

Mondal Rajat Kumar1,Karmakar Debayan1,Pal Oshin1,Samanta Sintu Kumar1

Affiliation:

1. Indian Institute of Information Technology, IIIT-A)

Abstract

Abstract

The rise of multi-drug resistant (MDR) bacteria, especially strains of Staphylococcus aureus like Vancomycin-resistant Staphylococcus aureus (VRSA), Vancomycin-intermediate Staphylococcus aureus (VISA), and Vancomycin-susceptible Staphylococcus aureus (VSSA), poses a severe threat to global health. This situation underscores the urgent need for novel antimicrobial agents to combat these resistant strains effectively. Here, we are introducing the Anti-Vancomycin-Resistant/Intermediate/Susceptible Staphylococcus aureusPeptide Database (AVR/I/SSAPDB), a manually curated comprehensive and specialized knowledgebase dedicated to antimicrobial peptides (AMPs) that target VRSA, VISA, and VSSA with clinical and non-clinical significance. Our database sources data from PubMed, cataloging 491 experimentally validated AMPs with detailed annotations on peptides, activity, and cross-references to external databases like PubMed, UniProt, PDB, and DrugBank. AVR/I/SSAPDB offers a user-friendly interface with simple to advanced search capabilities, enabling researchers to explore AMPs against VRSA, VISA, and VSSA. We are hoping that this resource will be helpful to the scientific community in developing targeted peptide-based therapeutics, providing a crucial tool for combating VRSA, VISA, and VSSA, and addressing a major public health concern. AVR/I/SSAPDB is freely accessible via any web-browser at URL: https://bblserver.org.in/avrissa/.

Publisher

Springer Science and Business Media LLC

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